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Protein

Arginine--tRNA ligase

Gene

argS

Organism
Desulfococcus oleovorans (strain DSM 6200 / Hxd3)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionAminoacyl-tRNA synthetase, Ligase
Biological processProtein biosynthesis
LigandATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Arginine--tRNA ligaseUniRule annotation (EC:6.1.1.19UniRule annotation)
Alternative name(s):
Arginyl-tRNA synthetaseUniRule annotation
Short name:
ArgRSUniRule annotation
Gene namesi
Name:argSUniRule annotation
Ordered Locus Names:Dole_3215
OrganismiDesulfococcus oleovorans (strain DSM 6200 / Hxd3)
Taxonomic identifieri96561 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfococcus
Proteomesi
  • UP000008561 Componenti: Chromosome

Subcellular locationi

A9A099:
  • Cytoplasm UniRule annotation

GO - Cellular componenti

Keywords - Cellular componenti

Cytoplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_10001988961 – 556Arginine--tRNA ligaseAdd BLAST556

Proteomic databases

PRIDEiA9A099.

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi96561.Dole_3215.

Structurei

3D structure databases

ProteinModelPortaliA9A099.
SMRiA9A099.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi129 – 139"HIGH" regionAdd BLAST11

Sequence similaritiesi

Belongs to the class-I aminoacyl-tRNA synthetase family.UniRule annotation

Phylogenomic databases

eggNOGiENOG4105C75. Bacteria.
COG0018. LUCA.
HOGENOMiHOG000247214.
KOiK01887.
OMAiNKPLHLG.
OrthoDBiPOG091H01RF.

Family and domain databases

CDDicd00671. ArgRS_core. 1 hit.
Gene3Di1.10.730.10. 1 hit.
3.30.1360.70. 1 hit.
3.40.50.620. 1 hit.
HAMAPiMF_00123. Arg_tRNA_synth. 1 hit.
InterProiView protein in InterPro
IPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-ligase.
IPR005148. Arg-tRNA-synth_N.
IPR036695. Arg-tRNA-synth_N_sf.
IPR035684. ArgRS_core.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_Ia_anticodon-bd.
PANTHERiPTHR11956. PTHR11956. 1 hit.
PfamiView protein in Pfam
PF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
PRINTSiPR01038. TRNASYNTHARG.
SMARTiView protein in SMART
SM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
SUPFAMiSSF47323. SSF47323. 1 hit.
SSF55190. SSF55190. 1 hit.
TIGRFAMsiTIGR00456. argS. 1 hit.
PROSITEiView protein in PROSITE
PS00178. AA_TRNA_LIGASE_I. 1 hit.

Sequencei

Sequence statusi: Complete.

A9A099-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKETLQAMIR AAATAAFEKG ALTASRFPDI ELEAPRFRDH GDFATNLAMV
60 70 80 90 100
SASTQKMAPR KIAEAIVAHL ADSAGILLKT EIAGPGFINF FICPEAWLPV
110 120 130 140 150
LHRIHEDQER FGACDLGGGK RVQVEFVSAN PTGPLHVGHG RGAAVGDSVA
160 170 180 190 200
RILAFCGWQV HREYYVNDAG NQILTLGRSV LLRWRELSGQ AVDFPEDCYQ
210 220 230 240 250
GDYIRSIARQ IDAEHRQALE KMESAEAVAF CARVAADQIL DGIRRDLADF
260 270 280 290 300
SITFDQWFSE KSLVETGAVE TTLARLKETG VVYESEGALW FATSRFGDEK
310 320 330 340 350
DRVVVRNNGE ATYFASDIAY HKNKFDRGFN RVIDVWGADH HGYIPRVKAA
360 370 380 390 400
IGAVGRSQDD LDVILVQLVA LLREGQPVSM STRSGEFVTL KEVTNEVGAD
410 420 430 440 450
AARFIFLSRH YDSPLDFDLE LAKKKSNDNP VYYVQYVHAR IASMLKKAAE
460 470 480 490 500
EKGIGRVTAV DDKTLRRLAE PEEIDLVKLL ARYPEAVSHA ARFLEPHRIT
510 520 530 540 550
FYLLDLAAGF HGYYSRHKVL TEDDGLTMAR LYLVCAVKQV IKNGLALLGV

SAPESM
Length:556
Mass (Da):61,650
Last modified:January 15, 2008 - v1
Checksum:iA8445309FFE01823
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000859 Genomic DNA. Translation: ABW69018.1.
RefSeqiWP_012176628.1. NC_009943.1.

Genome annotation databases

EnsemblBacteriaiABW69018; ABW69018; Dole_3215.
KEGGidol:Dole_3215.

Similar proteinsi

Entry informationi

Entry nameiSYR_DESOH
AccessioniPrimary (citable) accession number: A9A099
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 14, 2009
Last sequence update: January 15, 2008
Last modified: October 25, 2017
This is version 60 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Aminoacyl-tRNA synthetases
    List of aminoacyl-tRNA synthetase entries
  2. SIMILARITY comments
    Index of protein domains and families