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Protein
Submitted name:

Pyridoxal-dependent decarboxylase

Gene

Dole_0831

Organism
Desulfococcus oleovorans (strain DSM 6200 / Hxd3)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciDOLE96561:GHF3-852-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Pyridoxal-dependent decarboxylaseImported
Gene namesi
Ordered Locus Names:Dole_0831Imported
OrganismiDesulfococcus oleovorans (strain DSM 6200 / Hxd3)Imported
Taxonomic identifieri96561 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobacteraceaeDesulfococcus
ProteomesiUP000008561 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi96561.Dole_0831.

Structurei

3D structure databases

ProteinModelPortaliA8ZVT2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiEGTAMIS.
OrthoDBiEOG6MSRZP.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

A8ZVT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPRRTDRRDK IGRNGKPMRN TANRNTATTQ AGSRPLIADW NALMRVFIRP
60 70 80 90 100
EDEACRTTLI KYMEQILFGL HEFLAQHVGI TEDVSLKALA RQFKSTAIAE
110 120 130 140 150
NPEKRLAEVI QELIREISPY GVNVASPYFV GHMTSALPFF MVHLKTIAAA
160 170 180 190 200
LNQNLVKLET SKIFSLLEKQ VLAKIHRLIY RFPEQFYCDH VQNPETTLGS
210 220 230 240 250
FVEGGTTANI TALWVARNTF FAPRNDFAGI EADGSAAAFA EYGVKRAVIL
260 270 280 290 300
VSRRGHYSLR KAGGILGIGN KNIVAIDVDK EHRLDIGCLE QTIADIRKQG
310 320 330 340 350
DTAIVAVVGI AGATETGAVD PLRKIGELCA REKLFFHVDA AWGGPTILSD
360 370 380 390 400
THRHLLDGIE LADSVTIDGH KQFYMPMSCG MVYFKNPHIM DAVAYHANYV
410 420 430 440 450
NRHGSVDLGI RSLSGSREAN SLVLDSALKI MGKKGYALLI EHGIDTARKL
460 470 480 490 500
AEEIERRDLF EVVTWPQLNI LTYRVCPAGL KEIMQTGTDE ERIEAVHALN
510 520 530 540 550
HINKTVQRIQ REAGKSFVSR TTLMRRHYEK GIVVLRCVIM NPLTTMAVLN
560 570
DILDEQESIF RRYFPSPPPV YPS
Length:573
Mass (Da):64,089
Last modified:January 15, 2008 - v1
Checksum:iA8AB51F5AB9D9577
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000859 Genomic DNA. Translation: ABW66641.1.

Genome annotation databases

EnsemblBacteriaiABW66641; ABW66641; Dole_0831.
KEGGidol:Dole_0831.
PATRICi21691693. VBIDesOle35880_0858.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000859 Genomic DNA. Translation: ABW66641.1.

3D structure databases

ProteinModelPortaliA8ZVT2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi96561.Dole_0831.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABW66641; ABW66641; Dole_0831.
KEGGidol:Dole_0831.
PATRICi21691693. VBIDesOle35880_0858.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000282553.
KOiK01580.
OMAiEGTAMIS.
OrthoDBiEOG6MSRZP.

Enzyme and pathway databases

BioCyciDOLE96561:GHF3-852-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 6200 / Hxd3Imported.

Entry informationi

Entry nameiA8ZVT2_DESOH
AccessioniPrimary (citable) accession number: A8ZVT2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: July 22, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.