A8YXW6 (A8YXW6_LACH4) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Neopullulanase EMBL ABX27815.1

Gene names

Ordered Locus Names:

lhv_2001

Organism

Lactobacillus helveticus (strain DPC 4571) [Complete proteome] [HAMAP]

Taxonomic identifier

405566 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Lactobacillales › Lactobacillaceae › Lactobacillus

Protein attributes

Sequence length	573 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro hydrolase activity, hydrolyzing O-glycosyl compounds Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8YXW6 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 70D1EBC2C028EB4A	FASTA	573	66,071
	10 20 30 40 50 60 MQLAALKHRT ESEDSFVIDA THVRVRFHSA KNDVEKVIVH YCDNYLPLNQ AKTIEMTKIG 70 80 90 100 110 120 EGQVEDHWGA TLEAPFHRLK YTFEVIGNDG TSVVVGDRAI SSDVESALME DGYYFKVPYC 130 140 150 160 170 180 HDIDMVKTPE WVRHTVWYQI FPERFANGDK SNDPKNVKPW NPEDHPGRED YYGGDLQGVL 190 200 210 220 230 240 DHLDYLKKLG VNGLYFCPVF KAGSNHKYDT IDYLQIDPEF GDKDLFAKVV NEAHARGMKV 250 260 270 280 290 300 MLDAVFNHLG DKSMQWQDVV KNDPSSRFAG WFHINEYPVE PYHDPLQGEG NPQFDTFAFE 310 320 330 340 350 360 KHMPKLNTAN PEVQDFLLEI ATYWVKYFDI DAWRLDVANE VDHHFWKKFH KAVTDIKADF 370 380 390 400 410 420 YIVGEVWHSA RPWLNGDEFT GVMNYPYTLQ IEDHFFKHKL TADQMTKRLT DQLMKYRDST 430 440 450 460 470 480 NAAMMNMLDS HDTARILTVA NGDQDLALQA LTFEFVQKGS PCIYYGTEMG MTGGNDPDCR 490 500 510 520 530 540 KPMDWSKEDG PVWQRVHELI KFRLDHDETF GKGTIKLHVT ENGLIEVDRD GIESVKAYFN 550 560 570 TTDHDVKIDC KDSFSHDYQN GVLAPKGFVI TAR

References

[1]

"Genome sequence of Lactobacillus helveticus: an organism distinguished by selective gene loss and IS element expansion." Callanan M., Kaleta P., O'Callaghan J., O'Sullivan O., Jordan K., McAuliffe O., Sangrador-Vegas A., Slattery L., Fitzgerald G.F., Beresford T., Ross R.P. J. Bacteriol. 190:727-735(2008) [PubMed: 17993529] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000517 Genomic DNA. Translation: ABX27815.1.
RefSeq	YP_001578120.1. NC_010080.1.
3D structure databases
ProteinModelPortal	A8YXW6.
ModBase	Search...
Protein-protein interaction databases
STRING	A8YXW6.
Protein family/group databases
CAZy	CBM34. Carbohydrate-Binding Module Family 34. GH13. Glycoside Hydrolase Family 13.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5772614.
GenomeReviews	Gene locus lhv_2001 in contig CP000517_GR.
KEGG	lhe:lhv_2001.
PATRIC	22236356. VBILacHel91643_2119.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG726713.
OMA	FHINEYP.
ProtClustDB	CLSK924995.
Family and domain databases
InterPro	IPR015902. Alpha_amylase. IPR006047. Glyco_hydro_13_cat_dom. IPR004185. Glyco_hydro_13_lg-like_dom. IPR006589. Glyco_hydro_13_sub_cat_dom. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. IPR014756. Ig_E-set. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
PANTHER	PTHR10357. Alpha_amylase. 1 hit.
Pfam	PF00128. Alpha-amylase. 1 hit. PF02903. Alpha-amylase_N. 1 hit. [Graphical view]
SMART	SM00642. Aamy. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit. SSF81296. Ig_E-set. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8YXW6_LACH4

Accession

Primary (citable) accession number: A8YXW6

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)