Skip Header

Contribute Send feedback
Read comments (?) or add your own

A8XZV8 (A8XZV8_CAEBR) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Protein CBR-EARS-1 EMBL CAP38175.1
Gene names
Name:ears-1 WormBase CBG21346
Synonyms:Cbr-ears-1 EMBL CAP38175.1, cbr-ears-1 WormBase CBG21346
ORF Names:CBG21346 WormBase CBG21346, CBG_21346 EMBL CAP38175.1
OrganismCaenorhabditis briggsae [Reference proteome] EMBL CAP38175.1
Taxonomic identifier6238 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length1129 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. RuleBase RU003489

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Sequences

Sequence LengthMass (Da)Tools
A8XZV8 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: DADC7839BB400C73

FASTA1,129123,364
        10         20         30         40         50         60 
MVISRELVLK ADRKQAPYAS LLALAASGFS LEKSVQFSDG QKLVLNLDGE LVSNDVEIAK 

        70         80         90        100        110        120 
IISQSTASAD RLLGTSIVDF AVVDDITNVV AEAVTKNDFS CLLEKDFPNK IFENLLTVAD 

       130        140        150        160        170        180 
FAIFSVAHNN AELKTKFSGI IDRVLKDSSL AAAHNFVGLY KVAAVPAVKN VLTAGKEKKK 

       190        200        210        220        230        240 
DEGKFVELPG AEKGKVVVRF PPEASGYLHI GHAKAALLNQ YYQQEFEGQL IMRFDDTNPA 

       250        260        270        280        290        300 
KENAHFEHVI KEDLAMLNII PDRWTHSSDH FEMLLTMCEK LLKEGKAFVD DTDTETMRNE 

       310        320        330        340        350        360 
REQRQDSRNR GNTPDKNLQL WEEMKKGTEK GLTCCVRIKI DMKSNNGAMR DPTIYRCKPE 

       370        380        390        400        410        420 
EHVRTGLKYK VYPTYDFTCP IVDSVEGVTH ALRTTEYHDR DDQYYFICDA LGLRRPYIWE 

       430        440        450        460        470        480 
YARLNMTNTV MSKRKLTWFV DEGHVEGWDD PRLPTVRGVM RRGLTVDGLK QFIVAQGGSR 

       490        500        510        520        530        540 
SVVMMEWDKI WAFNKKVIDP VAPRYTALET TDSIVTIELV DSIGDDTSTV SLHPKNAEVG 

       550        560        570        580        590        600 
NKDIHKGKKL FLEQIDASTL KEGETVTFVN WGNIKIGKIE KKGNVVTKIT ASLQLDNTDY 

       610        620        630        640        650        660 
KKTTKVTWLG DVKTESGKPI PVVTAEYDHI ISKAIIGKDE DWKQFINFNS VHYKKMIGEP 

       670        680        690        700        710        720 
AIKNVKKGDI IQLQRKGFYI VDQPYSQKSE LSGVETPLLL ISIPDGHTGK EAEKVPKAAA 

       730        740        750        760        770        780 
ATNEQAKSSG SSEALQIYTS IEQQGNLVRD LKAKDAKSQD TKDAIAKLLE LKKKFKDVTS 

       790        800        810        820        830        840 
ADFKPGQPPA APAQSSTGGS DIAAQIDDQG LLVRDLKAKD AKSQATKDAI AKLLELKKKY 

       850        860        870        880        890        900 
KDVTGSEYKP GAAPAAPAQP STGGSDIAAQ IDAQGLLVRD LKAKDAKSQA TKDAIAKLLE 

       910        920        930        940        950        960 
LKKQYKDVTG SDYKPGSAPA AAPAQPSTGG SDIAAQIDAQ GLLVRDLKAK DAKSQATKDA 

       970        980        990       1000       1010       1020 
IAKLLELKKQ YKDVTGSDYK PGSAPAAAPA QPSTGGSDIT AQIDAQGLLV RDLKAKDAKS 

      1030       1040       1050       1060       1070       1080 
QETKDAIAKL LELKKKYKDV TGSDYKPGAA PAAPAAAPSS TGANGVDEAA LLEEINQQGA 

      1090       1100       1110       1120 
AVREAKAKDP KSQESTDAIN KLLALKATFK KVTGKDVPAP SNSKHGKKK

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		HE601293 Genomic DNA. Translation: CAP38175.1.
RefSeqXP_002639821.1. XM_002639775.1.

3D structure databases

ProteinModelPortalA8XZV8.
ModBaseSearch...

Protein-protein interaction databases

STRING6238.CBG21346.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaCBG21346; CBG21346; CBG21346.
GeneID8581815.
KEGGcbr:CBG21346.

Organism-specific databases

CTD8581815.
WormBaseCBG21346; CBP05079; WBGene00040150; Cbr-ears-1.

Phylogenomic databases

eggNOGCOG0008.
HOGENOMHOG000022047.
KOK01885.
OMAGSDHKPG.

Family and domain databases

Gene3D1.10.1160.10. 1 hit.
1.10.287.10. 6 hits.
2.40.240.10. 2 hits.
3.40.50.620. 2 hits.
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR004526. Glu-tRNA-synth_Ib_arc/euk.
IPR000924. Glu/Gln-tRNA-synth_Ib.
IPR020061. Glu/Gln-tRNA-synth_Ib_a-bdl.
IPR020058. Glu/Gln-tRNA-synth_Ib_cat-dom.
IPR020059. Glu/Gln-tRNA-synth_Ib_codon-bd.
IPR020056. Rbsml_L25/Gln-tRNA_synth_b-brl.
IPR011035. Ribosomal_L25/Gln-tRNA_synth.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009068. S15_NS1_RNA-bd.
IPR000738. WHEP-TRS.
[Graphical view]
PANTHERPTHR10119. PTHR10119. 1 hit.
PfamPF00749. tRNA-synt_1c. 1 hit.
PF03950. tRNA-synt_1c_C. 1 hit.
PF00458. WHEP-TRS. 6 hits.
[Graphical view]
PRINTSPR00987. TRNASYNTHGLU.
SMARTSM00991. WHEP-TRS. 6 hits.
[Graphical view]
SUPFAMSSF50715. Ribosomal_L25rel. 1 hit.
SSF47060. S15/NS1_bind. 6 hits.
TIGRFAMsTIGR00463. gltX_arch. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
PS51185. WHEP_TRS_2. 6 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8XZV8_CAEBR
AccessionPrimary (citable) accession number: A8XZV8
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: April 3, 2013
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info