A8XZA8 (A8XZA8_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CAP37975.1

Gene names

ORF Names:

CBG21051 WormBase CBG21051, CBG_21051 EMBL CAP37975.1

Organism

Caenorhabditis briggsae

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	352 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAP37975.1

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8XZA8 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: AD5AC729FE3FFDB6	FASTA	352	38,260
	10 20 30 40 50 60 MALRKCGNLF VAGLAGQSSR AASTMTVRDA LNQAMDEEIR RDDRVFLLGE EVAQYDGAYK 70 80 90 100 110 120 ISKGLWKKHG DKRIIDTPIT EMGFAGIAVG AAFAGLRPIC EFMTFNFSMQ AIDQIINSAA 130 140 150 160 170 180 KTYYMSAGRV PVPIVFRGPN GAAAGVAAQH SQDYSAWYAH CPGLKVLTPY SAEDAKGLLK 190 200 210 220 230 240 AAIRDDNPVV FLENEILYGQ SFPVSDEVLS DDFVVPIGKA KIERSGDHVT IVSYSRGVEF 250 260 270 280 290 300 ALEAAKQLES IGVSAEVINL RSLRPFDFES IRQSVHKTHH LVSVETGWPF AGIGAEIAAQ 310 320 330 340 350 VMESDVFDQL DAPLLRVTGV DVPMPYAHSL EQAALPTTEH VVKAVKKSLN IQ

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed: 14624247] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAC02000576 Genomic DNA. Translation: CAP37975.1.
RefSeq	XP_002634731.1. XM_002634685.1.
3D structure databases
ProteinModelPortal	A8XZA8.
SMR	A8XZA8. Positions 25-351.
ModBase	Search...
Protein-protein interaction databases
STRING	A8XZA8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8576724.
KEGG	cbr:CBG21051.
Organism-specific databases
CTD	8576724.
WormBase	CBG21051; CBP11678; WBGene00039931.
Phylogenomic databases
HOGENOM	HBG753264.
OMA	MEHAFDY.
PhylomeDB	A8XZA8.
Family and domain databases
InterPro	IPR009014. Transketo_C/Pyr-ferredox_oxred. IPR015941. Transketolase-like_C. IPR005475. Transketolase-like_Pyr-bd. IPR005476. Transketolase_C. [Graphical view]
Gene3D	G3DSA:3.40.50.920. Transketo_C_like. 1 hit.
KO	K00162.
Pfam	PF02779. Transket_pyr. 1 hit. PF02780. Transketolase_C. 1 hit. [Graphical view]
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
SUPFAM	SSF52922. Transketo_C_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8XZA8_CAEBR

Accession

Primary (citable) accession number: A8XZA8

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	November 16, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)