A8XYJ6 (A8XYJ6_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL CAP37713.1

Gene names

ORF Names:

CBG20759 WormBase CBG20759, CBG_20759 EMBL CAP37713.1

Organism

Caenorhabditis briggsae

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	358 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAP37713.1

Ontologies

Keywords
Domain	Repeat SAAS SAAS008930
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular function	catalytic activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	358	1	EMBL CAP37713.1

Sequences

	Sequence		Length	Mass (Da)
	A8XYJ6 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 39741945A46FFA6C	FASTA	358	40,244
	10 20 30 40 50 60 MCDVSTEEQL LEYAKKAAET GVPLKFEYKK HIGFLIRHLN VFPEPYNTLE TSRNTIFLFA 70 80 90 100 110 120 ISALDLLGEL DNLLTPERRQ GYIDWIYDLQ LTNGNVCGFR GSHSCEGSEY DEANLAQTYS 130 140 150 160 170 180 ALLSLAILGD DLKRVDRKAI LKTVKESQRD NGCFWSQGVG SESDMRFVFC AVAICKILDG 190 200 210 220 230 240 EKEDIIDWER LSLFLKKSLN IDGGIGQAPG DESHGGSTFC AVASLALANR LWTEEVLSRR 250 260 270 280 290 300 DIDRLIRWAI QKQNVGFHGR AHKPDDSCYA FWIGATLKIL NAYHLISKPH LREFLMISQH 310 320 330 340 350 MHIGGFCKYP EPGGYSDILH TYFSIAALSL LGEPALNPVH PSLNVSMRAA DHIARIRF

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed: 14624247] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAC02000575 Genomic DNA. Translation: CAP37713.1.
RefSeq	XP_002631581.1. XM_002631535.1.
3D structure databases
ProteinModelPortal	A8XYJ6.
ModBase	Search...
Protein-protein interaction databases
STRING	A8XYJ6.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8573579.
KEGG	cbr:CBG20759.
Organism-specific databases
CTD	8573579.
WormBase	CBG20759; CBP04950; WBGene00039684.
Phylogenomic databases
HOGENOM	HBG398025.
OMA	HGGTTFC.
PhylomeDB	A8XYJ6.
Family and domain databases
InterPro	IPR001330. Prenyltrans. IPR008930. Terpenoid_cyclase/PrenylTrfase. [Graphical view]
KO	K11713.
Pfam	PF00432. Prenyltrans. 1 hit. [Graphical view]
SUPFAM	SSF48239. Terp_cyc_toroid. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8XYJ6_CAEBR

Accession

Primary (citable) accession number: A8XYJ6

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)