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Protein
Submitted name:

Protein CBG19693

Gene

rpn-13

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBG19693Imported
Gene namesi
Name:rpn-13Imported
ORF Names:CBG19693Imported, CBG_19693Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome III

Organism-specific databases

WormBaseiCBG19693; CBP46154; WBGene00038868; Cbr-rpn-13.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi6238.CBG19693.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini228 – 333RPN13_CInterPro annotationAdd BLAST106

Phylogenomic databases

eggNOGiKOG3037. Eukaryota.
ENOG410XSJJ. LUCA.
HOGENOMiHOG000005947.
InParanoidiA8XW78.
OMAiGKMVHPD.
OrthoDBiEOG091G0FEO.

Family and domain databases

InterProiView protein in InterPro
IPR006773. 26S_Psome_Ubiquitin-recp_Rpn13.
IPR032368. RPN13_C.
PANTHERiPTHR12225. PTHR12225. 1 hit.
PfamiView protein in Pfam
PF04683. Proteasom_Rpn13. 1 hit.
PF16550. RPN13_C. 1 hit.

Sequencei

Sequence statusi: Complete.

A8XW78-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAAMFSNARS TTSSSGHIVE FKAGRSRLDA GSADTMRKVV AEPTKGLVYI
60 70 80 90 100
KQSNDMLIHF CWKNRETGAL VDDLIIFPDD AEFKAVTGCP DGKVYMLKFR
110 120 130 140 150
SSGEMKLFWL QDSTPDVDKD LVRKVNDALN KPPTSRPSAS RSSGSTTNAD
160 170 180 190 200
RPSAGGSSIM SGNDFNAPLG GLDQGQLMSL IQSLQGNSSD SLPLTAGSGA
210 220 230 240 250
APSSEADCEP TAGEGSSNPL SLDNPAIQNI FKNLGQQQKR QGGVSASLGE
260 270 280 290 300
ALANSTVADV AKNHADELAQ HLPASDDPAK ELADTVRTPQ FRQAADTLGH
310 320 330 340 350
ALQTGQLGPV LSQFGMNDET IAAATQGDLR KFATNLTKAE GGEQDKSAEE
360 370
NPEDDVAREP EAKRNRPDNE DMDVD
Length:375
Mass (Da):39,771
Last modified:December 16, 2008 - v2
Checksum:iCBB89BE8D32AECEC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600934 Genomic DNA. Translation: CAP36897.2.

Genome annotation databases

EnsemblMetazoaiCBG19693; CBG19693; WBGene00038868.

Similar proteinsi

Entry informationi

Entry nameiA8XW78_CAEBR
AccessioniPrimary (citable) accession number: A8XW78
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: December 16, 2008
Last modified: June 7, 2017
This is version 51 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported