A8XUF7 (A8XUF7_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CBR-MDH-1 protein EMBL CAP36282.1

Gene names

Name:	mdh-1 WormBase CBG18957
Synonyms:	Cbr-mdh-1 EMBL CAP36282.1, cbr-mdh-1 WormBase CBG18957
ORF Names:	CBG18957 WormBase CBG18957, CBG_18957 EMBL CAP36282.1

Organism

Caenorhabditis briggsae

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	336 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAP36282.1

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	cellular carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro malate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	L-malate dehydrogenase activity Inferred from electronic annotation. Source: InterPro nucleotide binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8XUF7 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: E58ECC60B2815E7C	FASTA	336	35,887
	10 20 30 40 50 60 MTAPLRVLVT GAAGQIGYSI VIRIADGTVF GKDQPVQLVL LDVPQCSNVL EGVVFELQDC 70 80 90 100 110 120 ALPTLHSVEA VTEEKPAFTG IDYAFLVGAM PRREGMERKD LLAANVKIFK SQGKALAEYA 130 140 150 160 170 180 KPTTKVIVVG NPANTNAFIA AKYAAGKIPA KNFSAMTRLD HNRALAQLAL KTGTTIGDVK 190 200 210 220 230 240 NVIIWGNHSG TQFPDVTHAT VKKNGTETDA YSAVGDNAFL QGPFIATVQK RGGVIIEKRK 250 260 270 280 290 300 LSSAMSAAKA ACDHIHDWHF GTKAGEHVSM AVPSDGSYGI PQGLIFSFPV TIESGEWKIV 310 320 330 QGLSFDDFAK GKIAATTKEL EEERDDALKA CDDANI

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed: 14624247] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAC02000558 Genomic DNA. Translation: CAP36282.1.
RefSeq	XP_002637274.1. XM_002637228.1.
3D structure databases
ProteinModelPortal	A8XUF7.
SMR	A8XUF7. Positions 2-329.
ModBase	Search...
Protein-protein interaction databases
STRING	A8XUF7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8579269.
KEGG	cbr:CBG18957.
Organism-specific databases
CTD	8579269.
WormBase	CBG18957; CBP19508; WBGene00038253; Cbr-mdh-1.
Phylogenomic databases
HOGENOM	HBG289884.
OMA	NFSAMTR.
PhylomeDB	A8XUF7.
Family and domain databases
InterPro	IPR001557. L-lactate/malate_DH. IPR022383. Lactate/malate_DH_C. IPR001236. Lactate/malate_DH_N. IPR015955. Lactate_DH/Glyco_Ohase_4_C. IPR001252. Malate_DH_AS. IPR011274. Malate_DH_NAD-dep_euk. IPR010945. Malate_DH_type2. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.90.110.10. lact_mal_DH. 1 hit. G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00025.
PANTHER	PTHR23382. MDH_SF1. 1 hit.
Pfam	PF02866. Ldh_1_C. 1 hit. PF00056. Ldh_1_N. 1 hit. [Graphical view]
PIRSF	PIRSF000102. Lac_mal_DH. 1 hit.
SUPFAM	SSF56327. Lactate_DH/Glyco_hydro_4_C. 1 hit.
TIGRFAMs	TIGR01759. MalateDH-SF1. 1 hit. TIGR01758. MDH_euk_cyt. 1 hit.
PROSITE	PS00068. MDH. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8XUF7_CAEBR

Accession

Primary (citable) accession number: A8XUF7

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	January 25, 2012
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)