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Protein

Probable Golgi SNAP receptor complex member 2

Gene

gosr-2.1

Organism
Caenorhabditis briggsae
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.By similarity

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Protein transport, Transport

Names & Taxonomyi

Protein namesi
Recommended name:
Probable Golgi SNAP receptor complex member 2By similarity
Gene namesi
Name:gosr-2.1
ORF Names:CBG16136
OrganismiCaenorhabditis briggsae
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000008549 Componentsi: Chromosome X, Unassembled WGS sequence

Organism-specific databases

WormBaseiCBG16136; CBP03915; WBGene00036173.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 189189CytoplasmicSequence AnalysisAdd
BLAST
Transmembranei190 – 21021Helical; Anchor for type IV membrane proteinSequence AnalysisAdd
BLAST
Topological domaini211 – 2122VesicularSequence Analysis

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Golgi apparatus, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 212212Probable Golgi SNAP receptor complex member 2PRO_0000351209Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG16136.

Structurei

3D structure databases

ProteinModelPortaliA8XP14.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the GOSR2 family.Sequence Analysis

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG148687.
HOGENOMiHOG000231153.
InParanoidiA8XP14.
KOiK08496.
OMAiEVYSSAK.
OrthoDBiEOG73RBCP.

Family and domain databases

InterProiIPR027027. GOSR2/Membrin/Bos1.
[Graphical view]
PIRSFiPIRSF028865. Membrin-2. 1 hit.

Sequencei

Sequence statusi: Complete.

A8XP14-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEAQYQSTNF LLQKVQHDLG RLEGTQNEQD AQVVVQSIYG DISTLKDNLQ
60 70 80 90 100
ALDNYVSREQ PARRQAARMR VDQLRMDVQR VDMAVSAVHT RMTQRWRSAS
110 120 130 140 150
EREELLSARY RPNDTALSIG DHELQLNDRL HSSHNRLDEL ISQGSAVLDN
160 170 180 190 200
LKSQHFSLRG VSRKMHDIGQ ALGLSNSTLQ VIDRRVREDW IFVIGCIVCC
210
IFMYAFYRFW RG
Length:212
Mass (Da):24,568
Last modified:January 15, 2008 - v1
Checksum:iAF059F28D140CAE9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600961 Genomic DNA. Translation: CAP34254.3.
RefSeqiXP_002643475.1. XM_002643429.1.

Genome annotation databases

EnsemblMetazoaiCBG16136; CBG16136; CBG16136.
GeneIDi8585468.
KEGGicbr:CBG16136.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600961 Genomic DNA. Translation: CAP34254.3.
RefSeqiXP_002643475.1. XM_002643429.1.

3D structure databases

ProteinModelPortaliA8XP14.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6238.CBG16136.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBG16136; CBG16136; CBG16136.
GeneIDi8585468.
KEGGicbr:CBG16136.

Organism-specific databases

CTDi8585468.
WormBaseiCBG16136; CBP03915; WBGene00036173.

Phylogenomic databases

eggNOGiNOG148687.
HOGENOMiHOG000231153.
InParanoidiA8XP14.
KOiK08496.
OMAiEVYSSAK.
OrthoDBiEOG73RBCP.

Family and domain databases

InterProiIPR027027. GOSR2/Membrin/Bos1.
[Graphical view]
PIRSFiPIRSF028865. Membrin-2. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AF16.

Entry informationi

Entry nameiGOSR2_CAEBR
AccessioniPrimary (citable) accession number: A8XP14
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 23, 2008
Last sequence update: January 15, 2008
Last modified: May 27, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programCaenorhabditis annotation project

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.