A8XMS0 (A8XMS0_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein CBR-FRG-1 EMBL CAP33946.1

Gene names

Name:	frg-1 WormBase CBG15774
Synonyms:	Cbr-frg-1 EMBL CAP33946.1, cbr-frg-1 WormBase CBG15774
ORF Names:	CBG15774 WormBase CBG15774, CBG_15774 EMBL CAP33946.1

Organism

Caenorhabditis briggsae [Reference proteome] EMBL CAP33946.1

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	281 AA.
Sequence status	Fragment.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	1	1	EMBL CAP33946.1

Sequences

	Sequence		Length	Mass (Da)
	A8XMS0 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 02BA4CE0E436D502	FASTA	281	31,241
	10 20 30 40 50 60 IFRIFRKMPG GDYNAVKGGG LKLKAGKKNL FKVGKDKKKR NKDEGEKVDP DTVENGGWRK 70 80 90 100 110 120 IAEYDMKGGI NVAIEVASGE KGFTRTYIAA MDNGKFTIGF PHPEGEGPNP EEIFALVKTP 130 140 150 160 170 180 DDSKISLKTG FGRYVGVDSE FQLVAFSEAI GVREQFLLVF QDGKTAFQAV ASPLFLSTVA 190 200 210 220 230 240 SKEGNVHVAS RTATENEMVN IRTDAVKEGP VDWRSAEDRK NARDCETAYV KMYQHSKVDL 250 260 270 280 KNRHIAIDVK DRKGVKKAQA EGSAHELLLD RRMKMKSDRY C

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16 EMBL CAP33946.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE600979 Genomic DNA. Translation: CAP33946.1.
RefSeq	XP_002640883.1. XM_002640837.1.
3D structure databases
ProteinModelPortal	A8XMS0.
ModBase	Search...
Protein-protein interaction databases
STRING	6238.CBG15774.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	CBG15774; CBG15774; CBG15774.
GeneID	8582877.
KEGG	cbr:CBG15774.
Organism-specific databases
CTD	8582877.
WormBase	CBG15774; CBP03774; WBGene00035916; Cbr-frg-1.
Phylogenomic databases
eggNOG	NOG289849.
HOGENOM	HOG000007130.
KO	K13122.
OMA	KFQKFQD.
Family and domain databases
InterPro	IPR008999. Actin_cross-linking. IPR010414. FRG1. [Graphical view]
PANTHER	PTHR12928. PTHR12928. 1 hit.
Pfam	PF06229. FRG1. 1 hit. [Graphical view]
SUPFAM	SSF50405. Actin_crosslink. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8XMS0_CAEBR

Accession

Primary (citable) accession number: A8XMS0

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	April 3, 2013
This is version 38 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)