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Protein
Submitted name:

Protein CBR-UNC-25

Gene

unc-25

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-UNC-25Imported
Gene namesi
Name:unc-25Imported
Synonyms:Cbr-unc-25Imported
ORF Names:CBG15755Imported, CBG_15755Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000008549 Componenti: Chromosome III

Organism-specific databases

WormBaseiCBG15755; CBP03839; WBGene00035897; Cbr-unc-25.

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG15755.

Structurei

3D structure databases

ProteinModelPortaliA8XMQ1.
SMRiA8XMQ1. Positions 14-507.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000005382.
InParanoidiA8XMQ1.
KOiK01580.
OMAiTNLRPPG.
OrthoDBiEOG7H1JM3.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.

Sequencei

Sequence statusi: Complete.

A8XMQ1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSSPVKDEQS DAMLEALIAK EILPQSGNWE GTEEFLNRVV QVLLKYIKDQ
60 70 80 90 100
NDRDQKILEF HHPDKMQMLI DLSIPEQPEN LLKLVKSCED VLRLGVRTGH
110 120 130 140 150
PRFFNQISCG LDLVSMAGEW LTATANTNMF TYEIAPVFIL MEKSVMTRMW
160 170 180 190 200
EAVGWDPEKA DGIFAPGGAI ANLYAMNAAR HQLWPRSKHL GMKDIPTLCC
210 220 230 240 250
FTSEDESHYS IKSASAVLGI GADHCFNIPT DKNGKMIPEA LEAKIIESKK
260 270 280 290 300
EGLTPFFVCC TAGTTVYGAF DPLERVANIC ERHKLWFHVD AAWGGGMLLS
310 320 330 340 350
PEHRYKLAGV ERANSVTWNP HKLMGALLQC SACLFRQDGL LFQCNQASAD
360 370 380 390 400
YLFQQDKPYD VSYDTGDKAI QCGRHNDVFK LWLMWKSKGM EGYRQQINKL
410 420 430 440 450
MDLSAYFTRR IKETEGFELI IENPEFLNIC FWYVPSKIRN LEPAEIKARL
460 470 480 490 500
EKIAPKIKAG MMQRGTTMVG YQPDKQRPNF FRMIISNQAI TREDLDFLIK
510
EIVDIGESLE
Length:510
Mass (Da):58,030
Last modified:January 15, 2008 - v1
Checksum:i5A33BC26003391EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600979 Genomic DNA. Translation: CAP33927.1.
RefSeqiXP_002640864.1. XM_002640818.1.

Genome annotation databases

EnsemblMetazoaiCBG15755; CBG15755; CBG15755.
GeneIDi8582858.
KEGGicbr:CBG15755.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600979 Genomic DNA. Translation: CAP33927.1.
RefSeqiXP_002640864.1. XM_002640818.1.

3D structure databases

ProteinModelPortaliA8XMQ1.
SMRiA8XMQ1. Positions 14-507.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6238.CBG15755.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBG15755; CBG15755; CBG15755.
GeneIDi8582858.
KEGGicbr:CBG15755.

Organism-specific databases

CTDi8582858.
WormBaseiCBG15755; CBP03839; WBGene00035897; Cbr-unc-25.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000005382.
InParanoidiA8XMQ1.
KOiK01580.
OMAiTNLRPPG.
OrthoDBiEOG7H1JM3.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AF16Imported.

Entry informationi

Entry nameiA8XMQ1_CAEBR
AccessioniPrimary (citable) accession number: A8XMQ1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: January 7, 2015
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.