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Protein
Submitted name:

Protein CBR-TWK-26

Gene

twk-26

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Ion channelUniRule annotationSAAS annotation

Keywords - Biological processi

Ion transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-TWK-26Imported
Gene namesi
Name:twk-26Imported
Synonyms:Cbr-twk-26Imported
ORF Names:CBG14123Imported, CBG_14123Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome X

Organism-specific databases

WormBaseiCBG14123; CBP35203; WBGene00034722; Cbr-twk-26.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei87 – 10418HelicalSequence analysisAdd
BLAST
Transmembranei183 – 20321HelicalSequence analysisAdd
BLAST
Transmembranei215 – 23218HelicalSequence analysisAdd
BLAST
Transmembranei238 – 25720HelicalSequence analysisAdd
BLAST
Transmembranei269 – 29123HelicalSequence analysisAdd
BLAST
Transmembranei303 – 32321HelicalSequence analysisAdd
BLAST
Transmembranei335 – 35622HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini185 – 24056Ion_trans_2InterPro annotationAdd
BLAST
Domaini280 – 35475Ion_trans_2InterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the two pore domain potassium channel (TC 1.A.1.8) family. [View classification]UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG1418. Eukaryota.
COG1226. LUCA.
HOGENOMiHOG000020179.
InParanoidiA8XJC8.
OMAiTERNNCI.
OrthoDBiEOG091G06KM.

Family and domain databases

InterProiIPR003280. 2pore_dom_K_chnl.
IPR003092. 2pore_dom_K_chnl_TASK.
IPR013099. K_chnl_dom.
[Graphical view]
PfamiPF07885. Ion_trans_2. 2 hits.
[Graphical view]
PRINTSiPR01333. 2POREKCHANEL.
PR01095. TASKCHANNEL.

Sequencei

Sequence statusi: Complete.

A8XJC8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDVDIKESEI QTRSRIIKNH LTERNNCIVL KIDTHMSKVE DMSPFGFHFE
60 70 80 90 100
FDAKKYKERK KQIRKQKITR FFAWLAYYHH KFGIRHITLV ALLVGYVFLG
110 120 130 140 150
GFMFEKLESP RELEDLKETI VLMQGIIDEE TQDIINLTLS TNGTDRNNKL
160 170 180 190 200
AKLIKRYYKT MLEAEGRFHG SVWHKAENLD MHLMWYFSSA TFYSMTLFST
210 220 230 240 250
IGYGTISCQT TWGRILSMIY ASIGLPIMLV VLGDIGEWFQ KVLTSGYVFL
260 270 280 290 300
LLKYKNLRKQ PLTKKKHDIL LPMWLALFLV LAYILICTLT ITIFDHNEGN
310 320 330 340 350
KPGIGFFDAF YFTFISLTTI GLGDVMPYNI QYSPFLAAAF LLGLALISIV
360 370 380 390 400
NTSIYAQLYR MFFNLINSVE DKLDRIHSSS HRGPGYRVFQ NMEPVFRMLV
410 420 430 440 450
CTFPPSHPQT RIKFAAVIRD SFREKKEKRD KDRKRESNTS DQIKLRTRTE
460 470 480 490 500
SDIPAHDGFH LWMANRAKKR QQEMSEDDAA VAARRRAPTL GAFGGFDMNL
510 520
FKPRGRANTS PFQREDSAET EESDVE
Length:526
Mass (Da):61,072
Last modified:December 16, 2008 - v2
Checksum:i07A2AFDCED6263BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600983 Genomic DNA. Translation: CAP32753.2.

Genome annotation databases

EnsemblMetazoaiCBG14123; CBG14123; CBG14123.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE600983 Genomic DNA. Translation: CAP32753.2.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBG14123; CBG14123; CBG14123.

Organism-specific databases

WormBaseiCBG14123; CBP35203; WBGene00034722; Cbr-twk-26.

Phylogenomic databases

eggNOGiKOG1418. Eukaryota.
COG1226. LUCA.
HOGENOMiHOG000020179.
InParanoidiA8XJC8.
OMAiTERNNCI.
OrthoDBiEOG091G06KM.

Family and domain databases

InterProiIPR003280. 2pore_dom_K_chnl.
IPR003092. 2pore_dom_K_chnl_TASK.
IPR013099. K_chnl_dom.
[Graphical view]
PfamiPF07885. Ion_trans_2. 2 hits.
[Graphical view]
PRINTSiPR01333. 2POREKCHANEL.
PR01095. TASKCHANNEL.
ProtoNetiSearch...

Entry informationi

Entry nameiA8XJC8_CAEBR
AccessioniPrimary (citable) accession number: A8XJC8
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: December 16, 2008
Last modified: September 7, 2016
This is version 64 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.