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A8XA17

- A8XA17_CAEBR

UniProt

A8XA17 - A8XA17_CAEBR

Protein
Submitted name:

Protein CBR-GPDH-2

Gene

gpdh-2

Organism
Caenorhabditis briggsae
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 59 (01 Oct 2014)
      Sequence version 1 (15 Jan 2008)
      Previous versions | rss
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    Functioni

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Binding sitei121 – 1211SubstrateUniRule annotation
    Active sitei209 – 2091Proton acceptorUniRule annotation

    GO - Molecular functioni

    1. glycerol-3-phosphate dehydrogenase [NAD+] activity Source: InterPro
    2. NAD binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro
    2. glycerol-3-phosphate catabolic process Source: InterPro

    Keywords - Molecular functioni

    OxidoreductaseUniRule annotation

    Keywords - Ligandi

    NADUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein CBR-GPDH-2Imported
    Gene namesi
    Name:gpdh-2Imported
    Synonyms:Cbr-gpdh-2Imported
    ORF Names:CBG09958Imported, CBG_09958Imported
    OrganismiCaenorhabditis briggsaeImported
    Taxonomic identifieri6238 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000008549: Chromosome III

    Organism-specific databases

    WormBaseiCBG09958; CBP02434; WBGene00031452; Cbr-gpdh-2.

    Subcellular locationi

    GO - Cellular componenti

    1. glycerol-3-phosphate dehydrogenase complex Source: InterPro

    Interactioni

    Protein-protein interaction databases

    STRINGi6238.CBG09958.

    Structurei

    3D structure databases

    ProteinModelPortaliA8XA17.
    SMRiA8XA17. Positions 1-353.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Region

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Regioni273 – 2742Substrate binding

    Sequence similaritiesi

    Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.UniRule annotation

    Phylogenomic databases

    eggNOGiCOG0240.
    HOGENOMiHOG000246855.
    KOiK00006.
    OMAiPVGEFIH.
    OrthoDBiEOG7ZKSBS.

    Family and domain databases

    Gene3Di1.10.1040.10. 1 hit.
    3.40.50.720. 1 hit.
    InterProiIPR008927. 6-PGluconate_DH_C-like.
    IPR013328. DH_multihelical.
    IPR006168. G3P_DH_NAD-dep.
    IPR006109. G3P_DH_NAD-dep_C.
    IPR017751. G3P_DH_NAD-dep_euk.
    IPR011128. G3P_DH_NAD-dep_N.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view]
    PANTHERiPTHR11728. PTHR11728. 1 hit.
    PfamiPF07479. NAD_Gly3P_dh_C. 1 hit.
    PF01210. NAD_Gly3P_dh_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
    PRINTSiPR00077. GPDHDRGNASE.
    SUPFAMiSSF48179. SSF48179. 1 hit.
    TIGRFAMsiTIGR03376. glycerol3P_DH. 1 hit.
    PROSITEiPS00957. NAD_G3PDH. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8XA17-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSPKKVTIIG SGNWGSAIAR IVGNTTKSFP DQFDPQVRMY VYEEIVNGEK    50
    LSEVINTRHE NIKYLPGKIL PENVVAVTDL VKSCEGSNIL IFVVPHQFVK 100
    GLCEKLVGKI PADTQAISLI KGVSTGGIER GGLKLISEEI KEILKIEVSV 150
    LMGANLAPEV ANDNFCEATI GCKRKAEDGP LLKKLFHTDN FRINVVEDAH 200
    TVELCGALKN VVACAAGFTD GLGYGDNTKA AVIRLGLMET TKFVEHYYPG 250
    SNLETFFESC GIADLITTCY GGRNRKVCEA FVKTGKTLAE VEKELLNGQS 300
    AQGPLTAEEV YLMMKKTGLD AKFPLFTAVH KICAGEMKPA ELVDCLRNHP 350
    EHM 353
    Length:353
    Mass (Da):38,467
    Last modified:January 15, 2008 - v1
    Checksum:i0EAB0D53A386CF45
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE601459 Genomic DNA. Translation: CAP29482.1.
    RefSeqiXP_002641636.1. XM_002641590.1.

    Genome annotation databases

    EnsemblMetazoaiCBG09958; CBG09958; CBG09958.
    GeneIDi8583627.
    KEGGicbr:CBG09958.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE601459 Genomic DNA. Translation: CAP29482.1 .
    RefSeqi XP_002641636.1. XM_002641590.1.

    3D structure databases

    ProteinModelPortali A8XA17.
    SMRi A8XA17. Positions 1-353.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 6238.CBG09958.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai CBG09958 ; CBG09958 ; CBG09958 .
    GeneIDi 8583627.
    KEGGi cbr:CBG09958.

    Organism-specific databases

    CTDi 8583627.
    WormBasei CBG09958 ; CBP02434 ; WBGene00031452 ; Cbr-gpdh-2.

    Phylogenomic databases

    eggNOGi COG0240.
    HOGENOMi HOG000246855.
    KOi K00006.
    OMAi PVGEFIH.
    OrthoDBi EOG7ZKSBS.

    Family and domain databases

    Gene3Di 1.10.1040.10. 1 hit.
    3.40.50.720. 1 hit.
    InterProi IPR008927. 6-PGluconate_DH_C-like.
    IPR013328. DH_multihelical.
    IPR006168. G3P_DH_NAD-dep.
    IPR006109. G3P_DH_NAD-dep_C.
    IPR017751. G3P_DH_NAD-dep_euk.
    IPR011128. G3P_DH_NAD-dep_N.
    IPR016040. NAD(P)-bd_dom.
    [Graphical view ]
    PANTHERi PTHR11728. PTHR11728. 1 hit.
    Pfami PF07479. NAD_Gly3P_dh_C. 1 hit.
    PF01210. NAD_Gly3P_dh_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000114. Glycerol-3-P_dh. 1 hit.
    PRINTSi PR00077. GPDHDRGNASE.
    SUPFAMi SSF48179. SSF48179. 1 hit.
    TIGRFAMsi TIGR03376. glycerol3P_DH. 1 hit.
    PROSITEi PS00957. NAD_G3PDH. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: AF16Imported.

    Entry informationi

    Entry nameiA8XA17_CAEBR
    AccessioniPrimary (citable) accession number: A8XA17
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: January 15, 2008
    Last modified: October 1, 2014
    This is version 59 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3