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A8XA17 (A8XA17_CAEBR) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gpdh-2 WormBase CBG09958
Synonyms:Cbr-gpdh-2 EMBL CAP29482.1
ORF Names:CBG09958 WormBase CBG09958, CBG_09958 EMBL CAP29482.1
OrganismCaenorhabditis briggsae [Reference proteome] EMBL CAP29482.1
Taxonomic identifier6238 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length353 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. RuleBase RU000437

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region273 – 2742Substrate binding By similarity

Sites

Active site2091Proton acceptor By similarity PIRSR PIRSR000114-1
Binding site1211Substrate By similarity PIRSR PIRSR000114-2

Sequences

Sequence LengthMass (Da)Tools
A8XA17 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 0EAB0D53A386CF45

FASTA35338,467
        10         20         30         40         50         60 
MSPKKVTIIG SGNWGSAIAR IVGNTTKSFP DQFDPQVRMY VYEEIVNGEK LSEVINTRHE 

        70         80         90        100        110        120 
NIKYLPGKIL PENVVAVTDL VKSCEGSNIL IFVVPHQFVK GLCEKLVGKI PADTQAISLI 

       130        140        150        160        170        180 
KGVSTGGIER GGLKLISEEI KEILKIEVSV LMGANLAPEV ANDNFCEATI GCKRKAEDGP 

       190        200        210        220        230        240 
LLKKLFHTDN FRINVVEDAH TVELCGALKN VVACAAGFTD GLGYGDNTKA AVIRLGLMET 

       250        260        270        280        290        300 
TKFVEHYYPG SNLETFFESC GIADLITTCY GGRNRKVCEA FVKTGKTLAE VEKELLNGQS 

       310        320        330        340        350 
AQGPLTAEEV YLMMKKTGLD AKFPLFTAVH KICAGEMKPA ELVDCLRNHP EHM 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601459 Genomic DNA. Translation: CAP29482.1.
RefSeqXP_002641636.1. XM_002641590.1.

3D structure databases

ProteinModelPortalA8XA17.
SMRA8XA17. Positions 1-353.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING6238.CBG09958.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaCBG09958; CBG09958; CBG09958.
GeneID8583627.
KEGGcbr:CBG09958.

Organism-specific databases

CTD8583627.
WormBaseCBG09958; CBP02434; WBGene00031452; Cbr-gpdh-2.

Phylogenomic databases

eggNOGCOG0240.
HOGENOMHOG000246855.
KOK00006.
OMAPVGEFIH.
OrthoDBEOG7ZKSBS.

Family and domain databases

Gene3D1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERPTHR11728. PTHR11728. 1 hit.
PfamPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSPR00077. GPDHDRGNASE.
SUPFAMSSF48179. SSF48179. 1 hit.
TIGRFAMsTIGR03376. glycerol3P_DH. 1 hit.
PROSITEPS00957. NAD_G3PDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8XA17_CAEBR
AccessionPrimary (citable) accession number: A8XA17
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: June 11, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)