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A8XA17

- A8XA17_CAEBR

UniProt

A8XA17 - A8XA17_CAEBR

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Protein
Submitted name:

Protein CBR-GPDH-2

Gene
gpdh-2, Cbr-gpdh-2, CBG09958, CBG_09958
Organism
Caenorhabditis briggsae
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei121 – 1211Substrate By similarityUniRule annotation
Active sitei209 – 2091Proton acceptor By similarityUniRule annotation

GO - Molecular functioni

  1. glycerol-3-phosphate dehydrogenase [NAD+] activity Source: InterPro
  2. NAD binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. glycerol-3-phosphate catabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotation

Keywords - Ligandi

NADUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-GPDH-2Imported
Gene namesi
Name:gpdh-2Imported
Synonyms:Cbr-gpdh-2Imported
ORF Names:CBG09958Imported, CBG_09958Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000008549: Chromosome III

Organism-specific databases

WormBaseiCBG09958; CBP02434; WBGene00031452; Cbr-gpdh-2.

Subcellular locationi

GO - Cellular componenti

  1. glycerol-3-phosphate dehydrogenase complex Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG09958.

Structurei

3D structure databases

ProteinModelPortaliA8XA17.
SMRiA8XA17. Positions 1-353.

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni273 – 2742Substrate binding By similarity

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0240.
HOGENOMiHOG000246855.
KOiK00006.
OMAiPVGEFIH.
OrthoDBiEOG7ZKSBS.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11728. PTHR11728. 1 hit.
PfamiPF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSiPR00077. GPDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
TIGRFAMsiTIGR03376. glycerol3P_DH. 1 hit.
PROSITEiPS00957. NAD_G3PDH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8XA17-1 [UniParc]FASTAAdd to Basket

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MSPKKVTIIG SGNWGSAIAR IVGNTTKSFP DQFDPQVRMY VYEEIVNGEK    50
LSEVINTRHE NIKYLPGKIL PENVVAVTDL VKSCEGSNIL IFVVPHQFVK 100
GLCEKLVGKI PADTQAISLI KGVSTGGIER GGLKLISEEI KEILKIEVSV 150
LMGANLAPEV ANDNFCEATI GCKRKAEDGP LLKKLFHTDN FRINVVEDAH 200
TVELCGALKN VVACAAGFTD GLGYGDNTKA AVIRLGLMET TKFVEHYYPG 250
SNLETFFESC GIADLITTCY GGRNRKVCEA FVKTGKTLAE VEKELLNGQS 300
AQGPLTAEEV YLMMKKTGLD AKFPLFTAVH KICAGEMKPA ELVDCLRNHP 350
EHM 353
Length:353
Mass (Da):38,467
Last modified:January 15, 2008 - v1
Checksum:i0EAB0D53A386CF45
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE601459 Genomic DNA. Translation: CAP29482.1.
RefSeqiXP_002641636.1. XM_002641590.1.

Genome annotation databases

EnsemblMetazoaiCBG09958; CBG09958; CBG09958.
GeneIDi8583627.
KEGGicbr:CBG09958.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE601459 Genomic DNA. Translation: CAP29482.1 .
RefSeqi XP_002641636.1. XM_002641590.1.

3D structure databases

ProteinModelPortali A8XA17.
SMRi A8XA17. Positions 1-353.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 6238.CBG09958.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai CBG09958 ; CBG09958 ; CBG09958 .
GeneIDi 8583627.
KEGGi cbr:CBG09958.

Organism-specific databases

CTDi 8583627.
WormBasei CBG09958 ; CBP02434 ; WBGene00031452 ; Cbr-gpdh-2.

Phylogenomic databases

eggNOGi COG0240.
HOGENOMi HOG000246855.
KOi K00006.
OMAi PVGEFIH.
OrthoDBi EOG7ZKSBS.

Family and domain databases

Gene3Di 1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProi IPR008927. 6-PGluconate_DH_C-like.
IPR013328. DH_multihelical.
IPR006168. G3P_DH_NAD-dep.
IPR006109. G3P_DH_NAD-dep_C.
IPR017751. G3P_DH_NAD-dep_euk.
IPR011128. G3P_DH_NAD-dep_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view ]
PANTHERi PTHR11728. PTHR11728. 1 hit.
Pfami PF07479. NAD_Gly3P_dh_C. 1 hit.
PF01210. NAD_Gly3P_dh_N. 1 hit.
[Graphical view ]
PIRSFi PIRSF000114. Glycerol-3-P_dh. 1 hit.
PRINTSi PR00077. GPDHDRGNASE.
SUPFAMi SSF48179. SSF48179. 1 hit.
TIGRFAMsi TIGR03376. glycerol3P_DH. 1 hit.
PROSITEi PS00957. NAD_G3PDH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AF16Imported.

Entry informationi

Entry nameiA8XA17_CAEBR
AccessioniPrimary (citable) accession number: A8XA17
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: June 11, 2014
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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