A8X8K8 (A8X8K8_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CBR-CAT-4 protein EMBL CAP28969.1

Gene names

Name:	cat-4 WormBase CBG09642
Synonyms:	Cbr-cat-4 EMBL CAP28969.1, cbr-cat-4 WormBase CBG09642
ORF Names:	CBG09642 WormBase CBG09642, CBG_09642 EMBL CAP28969.1

Organism

Caenorhabditis briggsae

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	228 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAP28969.1

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	tetrahydrofolate biosynthetic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	GTP cyclohydrolase I activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8X8K8 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 6B1F1041F416C523	FASTA	228	25,664
	10 20 30 40 50 60 MSRIENESGF LSSDAASVGS EDDLKVDLKS DVKKTNGVNP KEDHLKSMRN AYESIIQHVG 70 80 90 100 110 120 EDIHRQGLLK TPERAAKAMM AFTKGYDDQL DELLNEAVFD EDHDEMVIVK DIEMFSLCEH 130 140 150 160 170 180 HLVPFMGKVH IGYIPNKKVL GLSKLARIVE MFSRRLQVQE RLTKQIATAM VQAVQPSGVA 190 200 210 220 VVIEASHMCM VMRGVQKINA STTTSCMLGV FRDDPKTREE FLNLINKR

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed: 14624247] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAC02000488 Genomic DNA. Translation: CAP28969.1.
RefSeq	XP_002637140.1. XM_002637094.1.
3D structure databases
ProteinModelPortal	A8X8K8.
SMR	A8X8K8. Positions 42-225.
ModBase	Search...
Protein-protein interaction databases
STRING	A8X8K8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8579136.
KEGG	cbr:CBG09642.
Organism-specific databases
CTD	8579136.
WormBase	CBG09642; CBP02395; WBGene00031200; Cbr-cat-4.
Phylogenomic databases
HOGENOM	HBG370191.
OMA	KQIATAM.
PhylomeDB	A8X8K8.
Family and domain databases
HAMAP	MF_00223. FolE. [Tree]
InterPro	IPR001474. GTP_CycHdrlase_I. IPR020602. GTP_CycHdrlase_I/CN_OxRdtase. IPR018234. GTP_CycHdrlase_I_CS. [Graphical view]
KO	K01495.
PANTHER	PTHR11109. GTP_cyclohydro_I. 1 hit.
Pfam	PF01227. GTP_cyclohydroI. 1 hit. [Graphical view]
TIGRFAMs	TIGR00063. FolE. 1 hit.
PROSITE	PS00859. GTP_CYCLOHYDROL_1_1. 1 hit. PS00860. GTP_CYCLOHYDROL_1_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8X8K8_CAEBR

Accession

Primary (citable) accession number: A8X8K8

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)