Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Protein CBR-FUM-1

Gene

fum-1

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-FUM-1Imported
Gene namesi
Name:fum-1Imported
Synonyms:Cbr-fum-1Imported
ORF Names:CBG09180Imported, CBG_09180Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome III

Organism-specific databases

WormBaseiCBG09180; CBP02243; WBGene00030818; Cbr-fum-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

PRIDEiA8X890.

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG09180.

Structurei

3D structure databases

ProteinModelPortaliA8X890.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini39 – 370Lyase_1InterPro annotationAdd BLAST332
Domaini436 – 488FumaraseC_CInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiKOG1317. Eukaryota.
COG0114. LUCA.
HOGENOMiHOG000061736.
InParanoidiA8X890.
KOiK01679.
OMAiGREVNSR.
OrthoDBiEOG091G05UL.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00743. FumaraseC. 1 hit.
InterProiIPR005677. Fum_hydII.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00979. fumC_II. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8X890-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLARGGAVIA RGASLVTARH LSRTTVSMAK IRKECDTFGE LEVPADKYYG
60 70 80 90 100
AQTARSQMNF KIGGPEERMP IPVIHAFGIL KKAAALVNTE FGLDKKLADA
110 120 130 140 150
ISQAADEVVA GKLDDHFPLV TWQTGSGTQS NMNVNEVISN RAIEILGGEL
160 170 180 190 200
GSKKPVHPND HVNMSQSSND TFPTAMHIAV GREVNSRLLP ALKKLRTALN
210 220 230 240 250
NKAEEFKDII KIGRTHTQDA VPLTLGQEFS AYVQQLDNSI ARVEATLPRL
260 270 280 290 300
YQLAAGGTAV GTGLNTRKGF AEKVAATVSE LTGLPFVTAP NKFEALAAHD
310 320 330 340 350
ALVEVHGALN TVAVSFMKIG NDIRFLGSGP RCGLGELSLP ENEPGSSIMP
360 370 380 390 400
GKVNPTQCEA ITMVAAQVMG NQVAVSVGGS NGHFELNVFK PLIVRNVLQS
410 420 430 440 450
TRLLADSAVS FTDHCVDGIV ANKDNIAKIM RESLMLVTAL NPHIGYDNAA
460 470 480 490
KIAKTAHKNG TTLVQEAVKL GILTEEQFAQ WVKPENMLGP K
Length:491
Mass (Da):52,496
Last modified:January 15, 2008 - v1
Checksum:iCDFF45D28F45C47D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601302 Genomic DNA. Translation: CAP28851.1.
RefSeqiXP_002642617.1. XM_002642571.1.

Genome annotation databases

EnsemblMetazoaiCBG09180; CBG09180; CBG09180.
GeneIDi8584611.
KEGGicbr:CBG09180.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601302 Genomic DNA. Translation: CAP28851.1.
RefSeqiXP_002642617.1. XM_002642571.1.

3D structure databases

ProteinModelPortaliA8X890.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6238.CBG09180.

Proteomic databases

PRIDEiA8X890.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBG09180; CBG09180; CBG09180.
GeneIDi8584611.
KEGGicbr:CBG09180.

Organism-specific databases

CTDi8584611.
WormBaseiCBG09180; CBP02243; WBGene00030818; Cbr-fum-1.

Phylogenomic databases

eggNOGiKOG1317. Eukaryota.
COG0114. LUCA.
HOGENOMiHOG000061736.
InParanoidiA8X890.
KOiK01679.
OMAiGREVNSR.
OrthoDBiEOG091G05UL.

Family and domain databases

Gene3Di1.10.275.10. 1 hit.
HAMAPiMF_00743. FumaraseC. 1 hit.
InterProiIPR005677. Fum_hydII.
IPR024083. Fumarase/histidase_N.
IPR018951. Fumarase_C_C.
IPR020557. Fumarate_lyase_CS.
IPR000362. Fumarate_lyase_fam.
IPR022761. Fumarate_lyase_N.
IPR008948. L-Aspartase-like.
[Graphical view]
PANTHERiPTHR11444. PTHR11444. 1 hit.
PfamiPF10415. FumaraseC_C. 1 hit.
PF00206. Lyase_1. 1 hit.
[Graphical view]
PRINTSiPR00149. FUMRATELYASE.
SUPFAMiSSF48557. SSF48557. 1 hit.
TIGRFAMsiTIGR00979. fumC_II. 1 hit.
PROSITEiPS00163. FUMARATE_LYASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiA8X890_CAEBR
AccessioniPrimary (citable) accession number: A8X890
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: October 5, 2016
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.