A8X822 (A8X822_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein CBR-ABI-1 EMBL CAP28783.1

Gene names

Name:	abi-1 WormBase CBG08994
Synonyms:	Cbr-abi-1 EMBL CAP28783.1, cbr-abi-1 WormBase CBG08994
ORF Names:	CBG08994 WormBase CBG08994, CBG_08994 EMBL CAP28783.1

Organism

Caenorhabditis briggsae [Reference proteome] EMBL CAP28783.1

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	487 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities	Contains 1 SH3 domain. RuleBase RU003338
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Domain	SH3 domain RuleBase RU003338
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular_component	cytoplasm Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8X822 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: 633B064932F62B2A	FASTA	487	53,723
	10 20 30 40 50 60 MLHHAEGGMS VPDLQELIER RIPDHRNQLE TSYSNLANVA AYLKNNYVTS NNQQHALDET 70 80 90 100 110 120 KQYAIQSLAS LAYQINKMAT DLNDMLALQT DKIDSLVNQV QYVNQVVDVH KEKLARREIG 130 140 150 160 170 180 ALTCNKTLFK QPKIIAPAVQ EPKIRYQRTP IDFSCLDGIG HGVRIAEPSR SGTTISRAAS 190 200 210 220 230 240 AISSSNPSAH SQLYNDSPAY GSYAGERTAT LGRASRPYAP SIAPSDYRLP QMTSESRMTR 250 260 270 280 290 300 QISHGSEFGE HMSGGGSGSQ HGSSDYNSIY QQDRYGTIRA GNRTDGMAAI SVPRLSSAQS 310 320 330 340 350 360 STGGPESPTF PLPPPQLSSL HYNGYVAPGS VVQQQQQQQQ QYQQQMQQQQ SYGTIRKPTV 370 380 390 400 410 420 TRNDLPPPPP SMLNPLSSQL STQDDMDDLP PPPESVGGSS AYGVFNRTES YTSSQPPSLF 430 440 450 460 470 480 DTSAGWMPNE YLEKVRVLYD YDAQKEDELT LRENAIVYVL KKNDDDWYEG VLDGVTGLFP GNYVVPM

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16 EMBL CAP28783.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE601284 Genomic DNA. Translation: CAP28783.1.
RefSeq	XP_002641142.1. XM_002641096.1.
3D structure databases
ProteinModelPortal	A8X822.
SMR	A8X822. Positions 410-484.
ModBase	Search...
Protein-protein interaction databases
STRING	6238.CBG08994.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	CBG08994; CBG08994; CBG08994.
GeneID	8583135.
KEGG	cbr:CBG08994.
Organism-specific databases
CTD	8583135.
WormBase	CBG08994; CBP08148; WBGene00030670; Cbr-abi-1.
Phylogenomic databases
eggNOG	NOG262939.
HOGENOM	HOG000293213.
OMA	EYCEANY.
Family and domain databases
InterPro	IPR012849. Abl-interactor_HHR_dom. IPR001452. SH3_domain. IPR000727. T_SNARE_dom. [Graphical view]
Pfam	PF07815. Abi_HHR. 1 hit. PF00018. SH3_1. 1 hit. [Graphical view]
PRINTS	PR00452. SH3DOMAIN.
SMART	SM00326. SH3. 1 hit. [Graphical view]
SUPFAM	SSF50044. SH3. 1 hit.
PROSITE	PS50002. SH3. 1 hit. PS50192. T_SNARE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8X822_CAEBR

Accession

Primary (citable) accession number: A8X822

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	April 3, 2013
This is version 44 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)