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Protein
Submitted name:

Protein CBR-ABI-1

Gene

abi-1

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-ABI-1Imported
Gene namesi
Name:abi-1Imported
Synonyms:Cbr-abi-1Imported, cbr-abi-1Imported
ORF Names:CBG08994Imported, CBG_08994Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000008549: Chromosome III

Organism-specific databases

WormBaseiCBG08994; CBP08148; WBGene00030670; Cbr-abi-1.

Subcellular locationi

GO - Cellular componenti

  1. cytoplasm Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG08994.

Structurei

3D structure databases

ProteinModelPortaliA8X822.
SMRiA8X822. Positions 410-484.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG262939.
HOGENOMiHOG000293213.
InParanoidiA8X822.
OMAiTEQSHIG.
OrthoDBiEOG7BS49J.

Family and domain databases

InterProiIPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8X822-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MLHHAEGGMS VPDLQELIER RIPDHRNQLE TSYSNLANVA AYLKNNYVTS
60 70 80 90 100
NNQQHALDET KQYAIQSLAS LAYQINKMAT DLNDMLALQT DKIDSLVNQV
110 120 130 140 150
QYVNQVVDVH KEKLARREIG ALTCNKTLFK QPKIIAPAVQ EPKIRYQRTP
160 170 180 190 200
IDFSCLDGIG HGVRIAEPSR SGTTISRAAS AISSSNPSAH SQLYNDSPAY
210 220 230 240 250
GSYAGERTAT LGRASRPYAP SIAPSDYRLP QMTSESRMTR QISHGSEFGE
260 270 280 290 300
HMSGGGSGSQ HGSSDYNSIY QQDRYGTIRA GNRTDGMAAI SVPRLSSAQS
310 320 330 340 350
STGGPESPTF PLPPPQLSSL HYNGYVAPGS VVQQQQQQQQ QYQQQMQQQQ
360 370 380 390 400
SYGTIRKPTV TRNDLPPPPP SMLNPLSSQL STQDDMDDLP PPPESVGGSS
410 420 430 440 450
AYGVFNRTES YTSSQPPSLF DTSAGWMPNE YLEKVRVLYD YDAQKEDELT
460 470 480
LRENAIVYVL KKNDDDWYEG VLDGVTGLFP GNYVVPM
Length:487
Mass (Da):53,723
Last modified:January 15, 2008 - v1
Checksum:i633B064932F62B2A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601284 Genomic DNA. Translation: CAP28783.1.
RefSeqiXP_002641142.1. XM_002641096.1.

Genome annotation databases

EnsemblMetazoaiCBG08994; CBG08994; CBG08994.
GeneIDi8583135.
KEGGicbr:CBG08994.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601284 Genomic DNA. Translation: CAP28783.1.
RefSeqiXP_002641142.1. XM_002641096.1.

3D structure databases

ProteinModelPortaliA8X822.
SMRiA8X822. Positions 410-484.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi6238.CBG08994.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCBG08994; CBG08994; CBG08994.
GeneIDi8583135.
KEGGicbr:CBG08994.

Organism-specific databases

CTDi8583135.
WormBaseiCBG08994; CBP08148; WBGene00030670; Cbr-abi-1.

Phylogenomic databases

eggNOGiNOG262939.
HOGENOMiHOG000293213.
InParanoidiA8X822.
OMAiTEQSHIG.
OrthoDBiEOG7BS49J.

Family and domain databases

InterProiIPR028457. ABI.
IPR012849. Abl-interactor_HHR_dom.
IPR001452. SH3_domain.
IPR000727. T_SNARE_dom.
[Graphical view]
PANTHERiPTHR10460. PTHR10460. 1 hit.
PfamiPF07815. Abi_HHR. 1 hit.
PF14604. SH3_9. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: AF16Imported.

Entry informationi

Entry nameiA8X822_CAEBR
AccessioniPrimary (citable) accession number: A8X822
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: January 7, 2015
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.