A8X5V5 (A8X5V5_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Protein CBR-SLI-1 EMBL CAP28016.1

Gene names

Name:	sli-1 WormBase CBG08124
Synonyms:	Cbr-sli-1 EMBL CAP28016.1, cbr-sli-1
ORF Names:	CBG08124 WormBase CBG08124, CBG_08124 EMBL CAP28016.1

Organism

Caenorhabditis briggsae [Reference proteome] EMBL CAP28016.1

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	546 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	cell surface receptor signaling pathway Inferred from electronic annotation. Source: InterPro protein ubiquitination Inferred from electronic annotation. Source: GOC regulation of signaling Inferred from electronic annotation. Source: InterPro
Cellular_component	nucleus Inferred from electronic annotation. Source: InterPro
Molecular_function	calcium ion binding Inferred from electronic annotation. Source: InterPro signal transducer activity Inferred from electronic annotation. Source: InterPro ubiquitin-protein ligase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8X5V5 [UniParc]. Last modified December 16, 2008. Version 2. Checksum: B75FCCDB5CE0B635	FASTA	546	62,365
	10 20 30 40 50 60 MGSINTIFHR IHRFVNGGNN VRFVPNTTPA PETLTLNPRA MPSIVSDRRF LLKACKFMDQ 70 80 90 100 110 120 VVKSCHSPRL NLKNSPPFIL DILPDTYTHL MLIFTHNNDI LQDNEYLRLF LESLINKCKE 130 140 150 160 170 180 IIKLFKTSGI YNDQSDERRK LTKMSLTFSH MLFEIKALFP EGQYIEDRFR MTKKEADCFW 190 200 210 220 230 240 SQHFLKKNIV PWPAFLIALE KHHGAVLGKM EAAELKSTID LSGDDFISNF EFDVFTRLFY 250 260 270 280 290 300 PFKTLIKNWQ TLTSAHPGYC AFLTYDEVKK RLEKLTRKPG SYIFRLSCTR PGQWAIGYVA 310 320 330 340 350 360 PDGKIYQTIP QNKSLIQALH EGHKEGFYIY PNGREQDINL SKLMDVPQAD RVQVTSEQYE 370 380 390 400 410 420 LYCEMGTTFE LCKICDDNEK NIKIERADIC YAQNDSDGGG NTCPFCRYEI KGTNRVIIDR 430 440 450 460 470 480 FKPTSAEIAK VAERKLIAIA PDIPPRTYVS QTQSLPHESH SIPSVDELPL VPPPLPAKTL 490 500 510 520 530 540 AVKEMMNTSQ SSASYVNVRE LENVATSSDG ELSRQRAPSV LAPPLPPRLS ILEPPRHEYT NTSNLA

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16 EMBL CAP28016.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE600971 Genomic DNA. Translation: CAP28016.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	6238.CBG08124.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	CBG08124; CBG08124; CBG08124.
Organism-specific databases
WormBase	CBG08124; CBP30337; WBGene00029983; Cbr-sli-1.
Phylogenomic databases
eggNOG	NOG242251.
HOGENOM	HOG000294176.
Family and domain databases
Gene3D	1.10.238.10. 1 hit. 1.20.930.20. 1 hit. 3.30.505.10. 1 hit.
InterPro	IPR024162. Adaptor_Cbl. IPR014741. Adaptor_Cbl_EF_hand-like. IPR003153. Adaptor_Cbl_N_hlx. IPR014742. Adaptor_Cbl_SH2-like. IPR024159. Cbl_PTB. IPR011992. EF-hand-like_dom. IPR000980. SH2. [Graphical view]
PANTHER	PTHR23007. PTHR23007. 1 hit.
Pfam	PF02262. Cbl_N. 1 hit. PF02761. Cbl_N2. 1 hit. PF02762. Cbl_N3. 1 hit. [Graphical view]
SMART	SM00252. SH2. 1 hit. [Graphical view]
SUPFAM	SSF47668. Adaptor_Cbl_N. 1 hit.
PROSITE	PS51506. CBL_PTB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8X5V5_CAEBR

Accession

Primary (citable) accession number: A8X5V5

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	December 16, 2008
Last modified:	April 3, 2013
This is version 47 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)