A8WY28 (A8WY28_CAEBR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CBR-PAS-1 protein EMBL CAP25288.1

Gene names

Name:	pas-1 WormBase CBG04619
Synonyms:	Cbr-pas-1 EMBL CAP25288.1, cbr-pas-1 WormBase CBG04619
ORF Names:	CBG04619 WormBase CBG04619, CBG_04619 EMBL CAP25288.1

Organism

Caenorhabditis briggsae

Taxonomic identifier

6238 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	246 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CAP25288.1

Ontologies

Keywords
Cellular component	Nucleus SAAS SAAS000426
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	ubiquitin-dependent protein catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	proteasome core complex, alpha-subunit complex Inferred from electronic annotation. Source: InterPro
Molecular function	threonine-type endopeptidase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8WY28 [UniParc]. Last modified January 15, 2008. Version 1. Checksum: C8BC9D75EF161904	FASTA	246	27,218
	10 20 30 40 50 60 MSRGSSAGFD RHITIFSPEG RVYQVEYAFK AINSTNLTAV AVKGVDTAVI AIQKRVPDSL 70 80 90 100 110 120 IVADTVTSVY QISQSVGCCA IGMIPDAKFQ VKRAQGEAAS WKYKNGYDMP CELLAKKMAD 130 140 150 160 170 180 LNQYYTQNAE MRSLGCALLF ISYDDEKGPE VYRVDPAGYY RGMKGVSVGV KQVPATSFLE 190 200 210 220 230 240 KKIKKKPEMN STETIELAIE ALQNSLGIDV RSKDLEVVVV TKDNTKFTKL TNDQVEHHLN QIANRD

References

[1]

"The genome sequence of Caenorhabditis briggsae: a platform for comparative genomics." Stein L.D., Bao Z., Blasiar D., Blumenthal T., Brent M.R., Chen N., Chinwalla A., Clarke L., Clee C., Coghlan A., Coulson A., D'Eustachio P., Fitch D.H.A., Fulton L.A., Fulton R.E., Griffiths-Jones S., Harris T.W., Hillier L.W. , Kamath R., Kuwabara P.E., Mardis E.R., Marra M.A., Miner T.L., Minx P., Mullikin J.C., Plumb R.W., Rogers J., Schein J.E., Sohrmann M., Spieth J., Stajich J.E., Wei C., Willey D., Wilson R.K., Durbin R.M., Waterston R.H. PLoS Biol. 1:166-192(2003) [PubMed: 14624247] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: AF16.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CAAC02000462 Genomic DNA. Translation: CAP25288.1.
RefSeq	XP_002637829.1. XM_002637783.1.
3D structure databases
ProteinModelPortal	A8WY28.
SMR	A8WY28. Positions 2-245.
ModBase	Search...
Protein-protein interaction databases
STRING	A8WY28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8579826.
KEGG	cbr:CBG04619.
Organism-specific databases
CTD	8579826.
WormBase	CBG04619; CBP15101; WBGene00027257; Cbr-pas-1.
Phylogenomic databases
HOGENOM	HBG499923.
OMA	GKDCAVV.
PhylomeDB	A8WY28.
Family and domain databases
InterPro	IPR000426. Proteasome_asu_N. IPR023332. Proteasome_suA-type. IPR001353. Proteasome_sua/b. [Graphical view]
KO	K02730.
Pfam	PF00227. Proteasome. 1 hit. PF10584. Proteasome_A_N. 1 hit. [Graphical view]
SMART	SM00948. Proteasome_A_N. 1 hit. [Graphical view]
PROSITE	PS00388. PROTEASOME_A_1. 1 hit. PS51475. PROTEASOME_A_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8WY28_CAEBR

Accession

Primary (citable) accession number: A8WY28

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	January 15, 2008
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)