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A8WY01 (A8WY01_CAEBR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Histone deacetylase PIRNR PIRNR037913

EC=3.5.1.98 PIRNR PIRNR037913
Gene names
Name:hda-1 WormBase CBG04588
Synonyms:Cbr-hda-1 EMBL CAP25261.1
ORF Names:CBG04588 WormBase CBG04588, CBG_04588 EMBL CAP25261.1
OrganismCaenorhabditis briggsae [Reference proteome] EMBL CAP25261.1
Taxonomic identifier6238 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length455 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone. PIRNR PIRNR037913

Subcellular location

Nucleus By similarity PIRNR PIRNR037913.

Sequence similarities

Belongs to the histone deacetylase family. HD Type 1 subfamily. PIRNR PIRNR037913

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Sequences

Sequence LengthMass (Da)Tools
A8WY01 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 75F1C52EAC9FF2E9

FASTA45551,566
        10         20         30         40         50         60 
MNSNGPLQEH GKRRVAYYYD SNIGNYYYGQ GHVMKPHRIR MTHHLVLNYG LYRSMEIFRP 

        70         80         90        100        110        120 
FPATFDDMTR FHSEEYMLFL KSANPDNLKS FNKQMLKFNV GEDCPLFDGL YEFCQLSSGG 

       130        140        150        160        170        180 
SLAAATKLNK QKVDIAINWM GGLHHAKKSE ASGFCYTNDI VLGILELLKY HKRVLYVDID 

       190        200        210        220        230        240 
VHHGDGVEEA FYTTDRVMTV SFHKYGDFFP GTGDLKDIGA GKGKLYSVNV PLRDGITDSS 

       250        260        270        280        290        300 
YQSIFKPIMT KVMERFDPSA VVLQCGADSL NGDRLGPFNL TLKGHGECAR FFRSYNVPLM 

       310        320        330        340        350        360 
MVGGGGYTPR NVARCWTYET SIAVDREVAN ELPYNDYFEY FGPNYRLHIE QSNANNENNP 

       370        380        390        400        410        420 
ELLTKLQADV IANLEKLTFV PSVQMRPIED DALRSMNDSS ALVDMADPDR RLPAEVTDQM 

       430        440        450 
IQDEGDFYDG EREGDDRRNE SDGKRAAQLD SEGGK 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601135 Genomic DNA. Translation: CAP25261.1.
RefSeqXP_002637802.1. XM_002637756.1.

3D structure databases

ProteinModelPortalA8WY01.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING6238.CBG04588.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaCBG04588; CBG04588; CBG04588.
GeneID8579799.
KEGGcbr:CBG04588.

Organism-specific databases

CTD8579799.
WormBaseCBG04588; CBP06924; WBGene00027230; Cbr-hda-1.

Phylogenomic databases

eggNOGCOG0123.
HOGENOMHOG000225180.
KOK06067.
OMAQIQPDNE.
OrthoDBEOG7DNNTW.

Family and domain databases

Gene3D3.40.800.20. 1 hit.
InterProIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERPTHR10625. PTHR10625. 1 hit.
PfamPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSPR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNetSearch...

Entry information

Entry nameA8WY01_CAEBR
AccessionPrimary (citable) accession number: A8WY01
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: May 14, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)