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Protein
Submitted name:

Protein CBR-ACS-22

Gene

acs-22

Organism
Caenorhabditis briggsae
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Protein CBR-ACS-22Imported
Gene namesi
Name:acs-22Imported
Synonyms:Cbr-acs-22Imported
ORF Names:CBG00242Imported, CBG_00242Imported
OrganismiCaenorhabditis briggsaeImported
Taxonomic identifieri6238 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000008549 Componenti: Chromosome X

Organism-specific databases

WormBaseiCBG00242a; CBP35246; WBGene00023673; Cbr-acs-22.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 37HelicalSequence analysisAdd BLAST26
Transmembranei283 – 306HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi6238.CBG00242.

Structurei

3D structure databases

ProteinModelPortaliA8WMJ3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini84 – 515AMP-bindingInterPro annotationAdd BLAST432
Domaini524 – 602AMP-binding_CInterPro annotationAdd BLAST79

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1179. Eukaryota.
ENOG410XQ8T. LUCA.
HOGENOMiHOG000044189.
InParanoidiA8WMJ3.
OMAiLTALWAY.
OrthoDBiEOG091G0B76.

Family and domain databases

InterProiView protein in InterPro
IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
PfamiView protein in Pfam
PF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
PROSITEiView protein in PROSITE
PS00455. AMP_BINDING. 1 hit.

Sequencei

Sequence statusi: Complete.

A8WMJ3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADSPKFALV TFAVYAVILY NVNSFFWKFV FIGYVVFRLL RTDFGRRAMA
60 70 80 90 100
TIPRDFAGLK LLISVKSTIN ALFKKDRPIH EIFLDQVRQH PNKIAVVEIE
110 120 130 140 150
SGRKLTYKEL NELSNQYANL YVNEGYKIGD VVALFMENSI DFFAIWLGLS
160 170 180 190 200
KIGVVSAFIN SNLKLEPLAH SINVSKCKSC ITNNSLLPMY KAALEKGLIS
210 220 230 240 250
KDIHVFLAGT EVDGRHRSLQ QDLQLFSTEE PAPVDGLNFR SVLCYIYTSG
260 270 280 290 300
TTGNPKPAVI KHFRYYWIAM GAGKAFGMTK PDVVYITMPM YHSAAGIMGV
310 320 330 340 350
GSLIAFGTTC VIRKKFSASN FWKDCVKYNV TATQYIGEIC RYLLAAKPCP
360 370 380 390 400
EEKEHKVRLM WGNGLRGQIW KEFVGRFGIK KIGELYGSTE GNSNIVNLDN
410 420 430 440 450
HVGSCGFMPI YPHIGAFYPV RLIKVDRATG ELERDKNGLC VPCVPGETGE
460 470 480 490 500
MVGVIKEKDA LLKFEGYVSE GDTAKKIYRD VFKHGDKVFA SGDILHWDEL
510 520 530 540 550
GYLYFVDRCG DTFRWKGENV STTEVEGILQ PVMDVEDATV YGVTIGKMEG
560 570 580 590 600
RAGMAGVVVK DGIDIDKFLA DITSRLTENL ASYAIPVFIR LCKEVDRTGT
610 620 630 640 650
FKLKKTDLQK QGYDLAACKG DKIYYWVGSE KSYKPLTEKM QQDIDAGIYD

RF
Length:652
Mass (Da):73,193
Last modified:December 16, 2008 - v2
Checksum:i627092119D96CB4B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601409 Genomic DNA. Translation: CAP21698.2.

Genome annotation databases

EnsemblMetazoaiCBG00242; CBG00242; WBGene00023673.

Similar proteinsi

Entry informationi

Entry nameiA8WMJ3_CAEBR
AccessioniPrimary (citable) accession number: A8WMJ3
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: December 16, 2008
Last modified: June 7, 2017
This is version 59 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported