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A8WH42

- A8WH42_XENLA

UniProt

A8WH42 - A8WH42_XENLA

Protein
Submitted name:

LOC100127248 protein

Gene

lct.1

Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 40 (01 Oct 2014)
      Sequence version 1 (15 Jan 2008)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Protein family/group databases

    CAZyiGH1. Glycoside Hydrolase Family 1.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    LOC100127248 proteinImported
    Gene namesi
    Name:lct.1Imported
    Synonyms:LOC100127248Imported
    OrganismiXenopus laevis (African clawed frog)Imported
    Taxonomic identifieri8355 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

    Organism-specific databases

    XenbaseiXB-GENE-5930998. lct.1.

    Structurei

    3D structure databases

    ProteinModelPortaliA8WH42.
    SMRiA8WH42. Positions 1-46.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 1 family.UniRule annotation

    Phylogenomic databases

    HOVERGENiHBG053101.
    KOiK01229.

    Family and domain databases

    Gene3Di3.20.20.80. 2 hits.
    InterProiIPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10353. PTHR10353. 1 hit.
    PfamiPF00232. Glyco_hydro_1. 2 hits.
    [Graphical view]
    PRINTSiPR00131. GLHYDRLASE1.
    SUPFAMiSSF51445. SSF51445. 2 hits.
    PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8WH42-1 [UniParc]FASTAAdd to Basket

    « Hide

    MDTFEWNSGY SVRFGLHHVD FKNPSRPRTP KRSAIYYAEI IRNKGMPLSK    50
    EDEFLYGEFS KDFAWSVASA SYQIEGAWRA DGKSLSIWDQ YAHTPLRIGN 100
    DDNGDIACDS YNRIEQDVTA LKNLKVSHYR FSVSWSRILP DGTRNFVNEA 150
    GLNYYVRLID ALLVANISPQ VTLYHWDLPQ VLQNIGGWEN DTIVEKFKDY 200
    ADLLFQKLGD KVKFWITINE PYIVANLGYG YGTAAPGISS RPGRAPYIVG 250
    HNLIKAHAEA WHLYNDKYRA SQGGLISITI NSDWAEPRNP YKQEDVEAAR 300
    RYMMFYGGWF ANPIFNNGDY NEVMKSRVRE RSLASGLTQS RLPEFTESEK 350
    QRIKGTFDYF GFNHYTTILA SPFNLPISQQ TYDADRGVAS TTDHSWLGSG 400
    SFWLKVTPFG FRRILNWIKE EYNNPPILVT ENGISERGTD LNDVWREHYY 450
    KEYINEALKA VKYDGVDLRG YTAWSLMDNF EWATGFAERF GLHYTNYSDP 500
    ELARIPKKST KYYRSIILCN GFPDPSNGSP PCLEPETEGT TAPTVTTPPS 550
    GENQEEAVSF LGLEISPSDA EVALYVEFAF LIAAVLGIVL LSVFYRKLAK 600
    KPKMSNF 607
    Length:607
    Mass (Da):69,253
    Last modified:January 15, 2008 - v1
    Checksum:i764DCC64C42E3815
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC154965 mRNA. Translation: AAI54966.1.
    RefSeqiNP_001106299.1. NM_001112828.1.
    UniGeneiXl.56157.

    Genome annotation databases

    GeneIDi100127248.
    KEGGixla:100127248.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC154965 mRNA. Translation: AAI54966.1 .
    RefSeqi NP_001106299.1. NM_001112828.1.
    UniGenei Xl.56157.

    3D structure databases

    ProteinModelPortali A8WH42.
    SMRi A8WH42. Positions 1-46.
    ModBasei Search...
    MobiDBi Search...

    Protein family/group databases

    CAZyi GH1. Glycoside Hydrolase Family 1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 100127248.
    KEGGi xla:100127248.

    Organism-specific databases

    CTDi 100127248.
    Xenbasei XB-GENE-5930998. lct.1.

    Phylogenomic databases

    HOVERGENi HBG053101.
    KOi K01229.

    Family and domain databases

    Gene3Di 3.20.20.80. 2 hits.
    InterProi IPR001360. Glyco_hydro_1.
    IPR018120. Glyco_hydro_1_AS.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10353. PTHR10353. 1 hit.
    Pfami PF00232. Glyco_hydro_1. 2 hits.
    [Graphical view ]
    PRINTSi PR00131. GLHYDRLASE1.
    SUPFAMi SSF51445. SSF51445. 2 hits.
    PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
    PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. NIH - Xenopus Gene Collection (XGC) project
      Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: IntestineImported.

    Entry informationi

    Entry nameiA8WH42_XENLA
    AccessioniPrimary (citable) accession number: A8WH42
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: January 15, 2008
    Last modified: October 1, 2014
    This is version 40 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)