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A8WH42

- A8WH42_XENLA

UniProt

A8WH42 - A8WH42_XENLA

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Protein
Submitted name:

LOC100127248 protein

Gene
lct.1, LOC100127248
Organism
Xenopus laevis (African clawed frog)
Status
Unreviewed - Annotation score: 1 out of 5 - Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Submitted name:
LOC100127248 proteinImported
Gene namesi
Name:lct.1Imported
Synonyms:LOC100127248Imported
OrganismiXenopus laevis (African clawed frog)Imported
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-5930998. lct.1.

Structurei

3D structure databases

ProteinModelPortaliA8WH42.
SMRiA8WH42. Positions 1-46.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.UniRule annotation

Phylogenomic databases

HOVERGENiHBG053101.
KOiK01229.

Family and domain databases

Gene3Di3.20.20.80. 2 hits.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 2 hits.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 2 hits.
PROSITEiPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8WH42-1 [UniParc]FASTAAdd to Basket

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MDTFEWNSGY SVRFGLHHVD FKNPSRPRTP KRSAIYYAEI IRNKGMPLSK    50
EDEFLYGEFS KDFAWSVASA SYQIEGAWRA DGKSLSIWDQ YAHTPLRIGN 100
DDNGDIACDS YNRIEQDVTA LKNLKVSHYR FSVSWSRILP DGTRNFVNEA 150
GLNYYVRLID ALLVANISPQ VTLYHWDLPQ VLQNIGGWEN DTIVEKFKDY 200
ADLLFQKLGD KVKFWITINE PYIVANLGYG YGTAAPGISS RPGRAPYIVG 250
HNLIKAHAEA WHLYNDKYRA SQGGLISITI NSDWAEPRNP YKQEDVEAAR 300
RYMMFYGGWF ANPIFNNGDY NEVMKSRVRE RSLASGLTQS RLPEFTESEK 350
QRIKGTFDYF GFNHYTTILA SPFNLPISQQ TYDADRGVAS TTDHSWLGSG 400
SFWLKVTPFG FRRILNWIKE EYNNPPILVT ENGISERGTD LNDVWREHYY 450
KEYINEALKA VKYDGVDLRG YTAWSLMDNF EWATGFAERF GLHYTNYSDP 500
ELARIPKKST KYYRSIILCN GFPDPSNGSP PCLEPETEGT TAPTVTTPPS 550
GENQEEAVSF LGLEISPSDA EVALYVEFAF LIAAVLGIVL LSVFYRKLAK 600
KPKMSNF 607
Length:607
Mass (Da):69,253
Last modified:January 15, 2008 - v1
Checksum:i764DCC64C42E3815
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC154965 mRNA. Translation: AAI54966.1.
RefSeqiNP_001106299.1. NM_001112828.1.
UniGeneiXl.56157.

Genome annotation databases

GeneIDi100127248.
KEGGixla:100127248.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC154965 mRNA. Translation: AAI54966.1 .
RefSeqi NP_001106299.1. NM_001112828.1.
UniGenei Xl.56157.

3D structure databases

ProteinModelPortali A8WH42.
SMRi A8WH42. Positions 1-46.
ModBasei Search...
MobiDBi Search...

Protein family/group databases

CAZyi GH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 100127248.
KEGGi xla:100127248.

Organism-specific databases

CTDi 100127248.
Xenbasei XB-GENE-5930998. lct.1.

Phylogenomic databases

HOVERGENi HBG053101.
KOi K01229.

Family and domain databases

Gene3Di 3.20.20.80. 2 hits.
InterProi IPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10353. PTHR10353. 1 hit.
Pfami PF00232. Glyco_hydro_1. 2 hits.
[Graphical view ]
PRINTSi PR00131. GLHYDRLASE1.
SUPFAMi SSF51445. SSF51445. 2 hits.
PROSITEi PS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: IntestineImported.

Entry informationi

Entry nameiA8WH42_XENLA
AccessioniPrimary (citable) accession number: A8WH42
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: October 16, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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