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A8WH42 (A8WH42_XENLA) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:lct.1 Xenbase XB-GENE-5930998
Synonyms:LOC100127248 EMBL AAI54966.1
OrganismXenopus laevis (African clawed frog) EMBL AAI54966.1
Taxonomic identifier8355 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Protein attributes

Sequence length607 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A8WH42 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 764DCC64C42E3815

FASTA60769,253
        10         20         30         40         50         60 
MDTFEWNSGY SVRFGLHHVD FKNPSRPRTP KRSAIYYAEI IRNKGMPLSK EDEFLYGEFS 

        70         80         90        100        110        120 
KDFAWSVASA SYQIEGAWRA DGKSLSIWDQ YAHTPLRIGN DDNGDIACDS YNRIEQDVTA 

       130        140        150        160        170        180 
LKNLKVSHYR FSVSWSRILP DGTRNFVNEA GLNYYVRLID ALLVANISPQ VTLYHWDLPQ 

       190        200        210        220        230        240 
VLQNIGGWEN DTIVEKFKDY ADLLFQKLGD KVKFWITINE PYIVANLGYG YGTAAPGISS 

       250        260        270        280        290        300 
RPGRAPYIVG HNLIKAHAEA WHLYNDKYRA SQGGLISITI NSDWAEPRNP YKQEDVEAAR 

       310        320        330        340        350        360 
RYMMFYGGWF ANPIFNNGDY NEVMKSRVRE RSLASGLTQS RLPEFTESEK QRIKGTFDYF 

       370        380        390        400        410        420 
GFNHYTTILA SPFNLPISQQ TYDADRGVAS TTDHSWLGSG SFWLKVTPFG FRRILNWIKE 

       430        440        450        460        470        480 
EYNNPPILVT ENGISERGTD LNDVWREHYY KEYINEALKA VKYDGVDLRG YTAWSLMDNF 

       490        500        510        520        530        540 
EWATGFAERF GLHYTNYSDP ELARIPKKST KYYRSIILCN GFPDPSNGSP PCLEPETEGT 

       550        560        570        580        590        600 
TAPTVTTPPS GENQEEAVSF LGLEISPSDA EVALYVEFAF LIAAVLGIVL LSVFYRKLAK 


KPKMSNF 

« Hide

References

[1]NIH - Xenopus Gene Collection (XGC) project
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Intestine EMBL AAI54966.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BC154965 mRNA. Translation: AAI54966.1.
RefSeqNP_001106299.1. NM_001112828.1.
UniGeneXl.56157.

3D structure databases

ProteinModelPortalA8WH42.
SMRA8WH42. Positions 1-46.
ModBaseSearch...
MobiDBSearch...

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID100127248.
KEGGxla:100127248.

Organism-specific databases

CTD100127248.
XenbaseXB-GENE-5930998. lct.1.

Phylogenomic databases

HOVERGENHBG053101.
KOK01229.

Family and domain databases

Gene3D3.20.20.80. 2 hits.
InterProIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10353. PTHR10353. 1 hit.
PfamPF00232. Glyco_hydro_1. 2 hits.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. SSF51445. 2 hits.
PROSITEPS00572. GLYCOSYL_HYDROL_F1_1. 1 hit.
PS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8WH42_XENLA
AccessionPrimary (citable) accession number: A8WH42
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: October 16, 2013
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)