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A8WFV4 (A8WFV4_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 26. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
LOC799918 protein EMBL AAI54472.1
Gene names
Name:LOC799918 EMBL AAI54472.1
OrganismDanio rerio (Zebrafish) (Brachydanio rerio) EMBL AAI54472.1
Taxonomic identifier7955 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length706 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   DomainBromodomain SAAS SAAS018359
Gene Ontology (GO)
   Molecular_functionDNA binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue7061 EMBL AAI54472.1

Sequences

Sequence LengthMass (Da)Tools
A8WFV4 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: 67BAA0E0A7A8A73F

FASTA70682,616
        10         20         30         40         50         60 
MSQGCITSAE EIQSWWEVPA IAHFCSLFRT AFNLPDFEIE ELEQALLKQD QDFLSVLLCS 

        70         80         90        100        110        120 
LLKGCYQRSD ITIQSFSGYL EDIINYRWEL EEGKPNPLKE HPFEELPTRT QVELLHRLCD 

       130        140        150        160        170        180 
YRLDAADVFD RLKGLDSDSL RVEPLGQDGN GALYWYFYGT RLYKEEPVEV VSPQNSYDKA 

       190        200        210        220        230        240 
SEKKRRGRPP KNKPEDIDLS AVEEGVNSVK EEYERVEETK PAIERERGAW SVICETEEQW 

       250        260        270        280        290        300 
LNLAESIKDK ISPQDRHLSR IITQNFLPEI SNMIEHKEKE LKQKLLNSPK EHNSQSEQHS 

       310        320        330        340        350        360 
NKDNWQMQAT TEEERQRDED LERQVLLAEQ RKEDERLLQE EREREEQERV KAVEERARRR 

       370        380        390        400        410        420 
KQREEKAWLL SQGKELPPEL LNLETHSPIR RARRTKQFYE IDDDYTALYK VLEALKAHKD 

       430        440        450        460        470        480 
AWPFMEPVDE SYAPNYHEII QTPMDLSTIE RKLNDGEYLA KDEFVADVKL MFGNCLEYNG 

       490        500        510        520        530        540 
EESEYTIMAE SLERCFTRAL LKHFPSEDGD TDEEFHVSSE DRKDKKKNKN HKQSGPESLI 

       550        560        570        580        590        600 
RATEQVQKRK TSNSGKGNNQ QQEKPKSTLQ PPPPHYSNGP PHPHNIHPGQ QQRGMMHPAQ 

       610        620        630        640        650        660 
QFQRPSGPGM YAQHMMIDAQ YPYPGQRPLI SRPPGDHENQ HVPHSNIYEA CFLLNEDLVF 

       670        680        690        700 
HRLVLLKHPG LDDHVNCFGH SSDLPAQRGF VNVYNKSFWF KKKKKK

« Hide

References

[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (NOV-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Whole body EMBL AAI54472.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC154471 mRNA. Translation: AAI54472.1.
IPIIPI00883024.
UniGeneDr.95885.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Phylogenomic databases

eggNOGCOG5076.
OrthoDBEOG4S4PFB.

Family and domain databases

Gene3D1.20.920.10. 1 hit.
InterProIPR017956. AT_hook_DNA-bd_motif.
IPR001487. Bromodomain.
IPR018359. Bromodomain_CS.
IPR004022. DDT_dom.
[Graphical view]
PfamPF00439. Bromodomain. 1 hit.
PF02791. DDT. 1 hit.
[Graphical view]
PRINTSPR00503. BROMODOMAIN.
SMARTSM00384. AT_hook. 1 hit.
SM00297. BROMO. 1 hit.
[Graphical view]
SUPFAMSSF47370. Bromodomain. 1 hit.
PROSITEPS00633. BROMODOMAIN_1. 1 hit.
PS50014. BROMODOMAIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8WFV4_DANRE
AccessionPrimary (citable) accession number: A8WFV4
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: April 3, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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