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Protein

Actin-related protein 8

Gene

ARP8

Organism
Oryza sativa subsp. indica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi262 – 2654ATPBy similarity

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. structural constituent of cytoskeleton Source: EnsemblPlants/Gramene

GO - Biological processi

  1. actin filament-based process Source: EnsemblPlants/Gramene
Complete GO annotation...

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Actin-related protein 8
Alternative name(s):
F-box protein ARP8
Gene namesi
Name:ARP8
ORF Names:OsI_017201
OrganismiOryza sativa subsp. indica (Rice)
Taxonomic identifieri39946 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000007015 Componenti: Chromosome 4

Organism-specific databases

GrameneiA8WAT2.

Subcellular locationi

Nucleusnucleolus By similarity. Cytoplasm By similarity
Note: Localized to the nucleolus in interphase cells and dispersed in the cytoplasm in mitotic cells.By similarity

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. nucleolus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 484484Actin-related protein 8PRO_0000320546Add
BLAST

Proteomic databases

PRIDEiA8WAT2.

Structurei

3D structure databases

ProteinModelPortaliA8WAT2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 9047F-boxPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the actin family. Plant ARP8 subfamily.Curated
Contains 1 F-box domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG5277.

Family and domain databases

InterProiIPR004000. Actin.
IPR001810. F-box_dom.
IPR030071. Plant_Arp8.
[Graphical view]
PANTHERiPTHR11937. PTHR11937. 1 hit.
PTHR11937:SF161. PTHR11937:SF161. 1 hit.
PfamiPF00022. Actin. 1 hit.
PF12937. F-box-like. 1 hit.
[Graphical view]
SMARTiSM00268. ACTIN. 1 hit.
SM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8WAT2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL
60 70 80 90 100
PIDVLAQILR LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL
110 120 130 140 150
VVFAETHLGA GPALHPGLYY DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY
160 170 180 190 200
CKYGWSKYAA PSGRCATFLE FGNIESPMYA RLRHFLSTIY TRMQVKPSTQ
210 220 230 240 250
PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV CSVDQAVLAL
260 270 280 290 300
YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE
310 320 330 340 350
LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT
360 370 380 390 400
LSEERFKTAE ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT
410 420 430 440 450
VVLSGGSSCL PGLSERLEKE LRELLPAHIS EGIRVIPPPF GTDSAWFGAK
460 470 480
MISNVSTFTE AWCIKKKQFR QKTRRNGPSF VNVW
Length:484
Mass (Da):53,293
Last modified:January 15, 2008 - v1
Checksum:iB2D5677782F3F1E1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU214989 Genomic DNA. Translation: ABW90800.1.
EU214990 Genomic DNA. Translation: ABW90801.1.
EU214991 Genomic DNA. Translation: ABW90802.1.
EU214992 Genomic DNA. Translation: ABW90803.1.
EU214993 Genomic DNA. Translation: ABW90804.1.
EU214994 Genomic DNA. Translation: ABW90805.1.
EU214995 Genomic DNA. Translation: ABW90806.1.
EU214996 Genomic DNA. Translation: ABW90807.1.
EU214997 Genomic DNA. Translation: ABW90808.1.
EU214998 Genomic DNA. Translation: ABW90809.1.
EU214999 Genomic DNA. Translation: ABW90810.1.
EU215000 Genomic DNA. Translation: ABW90811.1.
EU215001 Genomic DNA. Translation: ABW90812.1.
EU215002 Genomic DNA. Translation: ABW90813.1.
EU215003 Genomic DNA. Translation: ABW90814.1.
EU215004 Genomic DNA. Translation: ABW90815.1.
EU215005 Genomic DNA. Translation: ABW90816.1.
EU215006 Genomic DNA. Translation: ABW90817.1.
EU215007 Genomic DNA. Translation: ABW90818.1.
EU215008 Genomic DNA. Translation: ABW90819.1.
EU215009 Genomic DNA. Translation: ABW90820.1.
EU215010 Genomic DNA. Translation: ABW90821.1.
EU215011 Genomic DNA. Translation: ABW90822.1.
EU215012 Genomic DNA. Translation: ABW90823.1.
EU215013 Genomic DNA. Translation: ABW90824.1.
EU215014 Genomic DNA. Translation: ABW90825.1.
EU215040 Genomic DNA. Translation: ABW90851.1.
CR855038 Genomic DNA. Translation: CAH65999.1.
CM000129 Genomic DNA. No translation available.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EU214989 Genomic DNA. Translation: ABW90800.1.
EU214990 Genomic DNA. Translation: ABW90801.1.
EU214991 Genomic DNA. Translation: ABW90802.1.
EU214992 Genomic DNA. Translation: ABW90803.1.
EU214993 Genomic DNA. Translation: ABW90804.1.
EU214994 Genomic DNA. Translation: ABW90805.1.
EU214995 Genomic DNA. Translation: ABW90806.1.
EU214996 Genomic DNA. Translation: ABW90807.1.
EU214997 Genomic DNA. Translation: ABW90808.1.
EU214998 Genomic DNA. Translation: ABW90809.1.
EU214999 Genomic DNA. Translation: ABW90810.1.
EU215000 Genomic DNA. Translation: ABW90811.1.
EU215001 Genomic DNA. Translation: ABW90812.1.
EU215002 Genomic DNA. Translation: ABW90813.1.
EU215003 Genomic DNA. Translation: ABW90814.1.
EU215004 Genomic DNA. Translation: ABW90815.1.
EU215005 Genomic DNA. Translation: ABW90816.1.
EU215006 Genomic DNA. Translation: ABW90817.1.
EU215007 Genomic DNA. Translation: ABW90818.1.
EU215008 Genomic DNA. Translation: ABW90819.1.
EU215009 Genomic DNA. Translation: ABW90820.1.
EU215010 Genomic DNA. Translation: ABW90821.1.
EU215011 Genomic DNA. Translation: ABW90822.1.
EU215012 Genomic DNA. Translation: ABW90823.1.
EU215013 Genomic DNA. Translation: ABW90824.1.
EU215014 Genomic DNA. Translation: ABW90825.1.
EU215040 Genomic DNA. Translation: ABW90851.1.
CR855038 Genomic DNA. Translation: CAH65999.1.
CM000129 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortaliA8WAT2.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PRIDEiA8WAT2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

GrameneiA8WAT2.

Phylogenomic databases

eggNOGiCOG5277.

Family and domain databases

InterProiIPR004000. Actin.
IPR001810. F-box_dom.
IPR030071. Plant_Arp8.
[Graphical view]
PANTHERiPTHR11937. PTHR11937. 1 hit.
PTHR11937:SF161. PTHR11937:SF161. 1 hit.
PfamiPF00022. Actin. 1 hit.
PF12937. F-box-like. 1 hit.
[Graphical view]
SMARTiSM00268. ACTIN. 1 hit.
SM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMiSSF81383. SSF81383. 1 hit.
PROSITEiPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "The extent of linkage disequilibrium in rice (Oryza sativa L.)."
    Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D.
    Genetics 177:2223-2232(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Guang-Lu-Ai No.4.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. 93-11.
  4. Cited for: REVIEW, GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiARP8_ORYSI
AccessioniPrimary (citable) accession number: A8WAT2
Secondary accession number(s): A2XYQ8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: January 15, 2008
Last modified: March 4, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.