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A8WAT2 (ARP8_ORYSI) Reviewed, UniProtKB/Swiss-Prot

Last modified June 11, 2014. Version 33. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Actin-related protein 8
Alternative name(s):
F-box protein ARP8
Gene names
Name:ARP8
ORF Names:OsI_017201
OrganismOryza sativa subsp. indica (Rice)
Taxonomic identifier39946 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza

Protein attributes

Sequence length484 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Subcellular location

Nucleusnucleolus By similarity. Cytoplasm By similarity. Note: Localized to the nucleolus in interphase cells and dispersed in the cytoplasm in mitotic cells By similarity.

Sequence similarities

Belongs to the actin family. Plant ARP8 subfamily.

Contains 1 F-box domain.

Ontologies

Keywords
   Cellular componentCytoplasm
Nucleus
   LigandATP-binding
Nucleotide-binding
Gene Ontology (GO)
   Cellular_componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

nucleolus

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 484484Actin-related protein 8
PRO_0000320546

Regions

Domain44 – 9047F-box
Nucleotide binding262 – 2654ATP By similarity

Sequences

Sequence LengthMass (Da)Tools
A8WAT2 [UniParc].

Last modified January 15, 2008. Version 1.
Checksum: B2D5677782F3F1E1

FASTA48453,293
        10         20         30         40         50         60 
MAVLLRKVWG SVLARAAAGA APPEAFAAAA SPRRPQAAGE YGSLGALDVL PIDVLAQILR 

        70         80         90        100        110        120 
LLGPADAARS TAVCRAWRLL ASDNGLWAFF LRLGPDPWEL VVFAETHLGA GPALHPGLYY 

       130        140        150        160        170        180 
DSSPQLSFKH VYTRRAVVPG SIIVDGGSGY CKYGWSKYAA PSGRCATFLE FGNIESPMYA 

       190        200        210        220        230        240 
RLRHFLSTIY TRMQVKPSTQ PIIVVLPLCH SDDTESARAS RKQYRDTLYS VLFDMNVPAV 

       250        260        270        280        290        300 
CSVDQAVLAL YAAKRTSGIV VNIGFNATSI VPIFQGRVMH EIGVETVGQG ALKLTGFLKE 

       310        320        330        340        350        360 
LMQQRNITFE SLYTVRTIKE KLCYVAADYE AEKRKDTQAS CEVDGEGWFT LSEERFKTAE 

       370        380        390        400        410        420 
ILFQPQIGGV RAMGLHKAVS LCMDHCYNSE VFGDDNWYKT VVLSGGSSCL PGLSERLEKE 

       430        440        450        460        470        480 
LRELLPAHIS EGIRVIPPPF GTDSAWFGAK MISNVSTFTE AWCIKKKQFR QKTRRNGPSF 


VNVW 

« Hide

References

« Hide 'large scale' references
[1]"The extent of linkage disequilibrium in rice (Oryza sativa L.)."
Mather K.A., Caicedo A.L., Polato N.R., Olsen K.M., McCouch S., Purugganan M.D.
Genetics 177:2223-2232(2007) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[2]"Sequence and analysis of rice chromosome 4."
Feng Q., Zhang Y., Hao P., Wang S., Fu G., Huang Y., Li Y., Zhu J., Liu Y., Hu X., Jia P., Zhang Y., Zhao Q., Ying K., Yu S., Tang Y., Weng Q., Zhang L. expand/collapse author list , Lu Y., Mu J., Lu Y., Zhang L.S., Yu Z., Fan D., Liu X., Lu T., Li C., Wu Y., Sun T., Lei H., Li T., Hu H., Guan J., Wu M., Zhang R., Zhou B., Chen Z., Chen L., Jin Z., Wang R., Yin H., Cai Z., Ren S., Lv G., Gu W., Zhu G., Tu Y., Jia J., Zhang Y., Chen J., Kang H., Chen X., Shao C., Sun Y., Hu Q., Zhang X., Zhang W., Wang L., Ding C., Sheng H., Gu J., Chen S., Ni L., Zhu F., Chen W., Lan L., Lai Y., Cheng Z., Gu M., Jiang J., Li J., Hong G., Xue Y., Han B.
Nature 420:316-320(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Guang-Lu-Ai No.4.
[3]"The genomes of Oryza sativa: a history of duplications."
Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L. expand/collapse author list , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. 93-11.
[4]"Plant actin-related proteins."
Kandasamy M.K., Deal R.B., McKinney E.C., Meagher R.B.
Trends Plant Sci. 9:196-202(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: REVIEW, GENE FAMILY, NOMENCLATURE.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
EU214989 Genomic DNA. Translation: ABW90800.1.
EU214990 Genomic DNA. Translation: ABW90801.1.
EU214991 Genomic DNA. Translation: ABW90802.1.
EU214992 Genomic DNA. Translation: ABW90803.1.
EU214993 Genomic DNA. Translation: ABW90804.1.
EU214994 Genomic DNA. Translation: ABW90805.1.
EU214995 Genomic DNA. Translation: ABW90806.1.
EU214996 Genomic DNA. Translation: ABW90807.1.
EU214997 Genomic DNA. Translation: ABW90808.1.
EU214998 Genomic DNA. Translation: ABW90809.1.
EU214999 Genomic DNA. Translation: ABW90810.1.
EU215000 Genomic DNA. Translation: ABW90811.1.
EU215001 Genomic DNA. Translation: ABW90812.1.
EU215002 Genomic DNA. Translation: ABW90813.1.
EU215003 Genomic DNA. Translation: ABW90814.1.
EU215004 Genomic DNA. Translation: ABW90815.1.
EU215005 Genomic DNA. Translation: ABW90816.1.
EU215006 Genomic DNA. Translation: ABW90817.1.
EU215007 Genomic DNA. Translation: ABW90818.1.
EU215008 Genomic DNA. Translation: ABW90819.1.
EU215009 Genomic DNA. Translation: ABW90820.1.
EU215010 Genomic DNA. Translation: ABW90821.1.
EU215011 Genomic DNA. Translation: ABW90822.1.
EU215012 Genomic DNA. Translation: ABW90823.1.
EU215013 Genomic DNA. Translation: ABW90824.1.
EU215014 Genomic DNA. Translation: ABW90825.1.
EU215040 Genomic DNA. Translation: ABW90851.1.
CR855038 Genomic DNA. Translation: CAH65999.1.
CM000129 Genomic DNA. No translation available.

3D structure databases

ProteinModelPortalA8WAT2.
ModBaseSearch...
MobiDBSearch...

Proteomic databases

PRIDEA8WAT2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

GrameneA8WAT2.

Phylogenomic databases

eggNOGCOG5277.

Family and domain databases

InterProIPR004000. Actin-related.
IPR001810. F-box_dom.
[Graphical view]
PANTHERPTHR11937. PTHR11937. 1 hit.
PfamPF00022. Actin. 1 hit.
PF12937. F-box-like. 1 hit.
[Graphical view]
SMARTSM00268. ACTIN. 1 hit.
SM00256. FBOX. 1 hit.
[Graphical view]
SUPFAMSSF81383. SSF81383. 1 hit.
PROSITEPS50181. FBOX. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameARP8_ORYSI
AccessionPrimary (citable) accession number: A8WAT2
Secondary accession number(s): A2XYQ8
Entry history
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: January 15, 2008
Last modified: June 11, 2014
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families