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Protein
Submitted name:

TreX

Gene

treX

Organism
Actinoplanes sp. SN223/29
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseSAAS annotation, Hydrolase

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Names & Taxonomyi

Protein namesi
Submitted name:
TreXImported
Gene namesi
Name:treXImported
OrganismiActinoplanes sp. SN223/29Imported
Taxonomic identifieri442459 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeActinoplanes

Structurei

3D structure databases

ProteinModelPortaliA8QX06.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini180 – 565AamyInterPro annotationAdd BLAST386

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.SAAS annotation

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR011837. Glycogen_debranch_GlgX.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 2 hits.
PF02922. CBM_48. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR02100. glgX_debranch. 1 hit.

Sequencei

Sequence statusi: Complete.

A8QX06-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVWPGHRYP LGATYDGTGT NFAIFSEVAE AVELCLFDAS GNERKVLLHE
60 70 80 90 100
QDAFVWHAYL PGVEPGQRYG YRVYGPYERT AGRCNPHKLL LDPYARAVDS
110 120 130 140 150
DIDWHPSLYA YEMGNPDQMS DLDSAPYMPK GVVVNPYFDW GNDRRPDIPY
160 170 180 190 200
HHSVIYETHV KGLTQRHPEI PREMRGTYAA IGHPAIIEHL KSLGVTAVEL
210 220 230 240 250
MPVHQFVHDN RLHDLGLRNY WGYNTLGFFA PYHGYSGTGT LGQQTQEFRG
260 270 280 290 300
MVKALHAAGM EVILDVVYNH TAEGNHLGPT LSLKGIDNRT YYRLVDDQPQ
310 320 330 340 350
FYMDYTGTGN SLNVRSPQSL QLIMDSLRYW VTEMHVDGFR FDLASTLARE
360 370 380 390 400
FYDVDRLSTF FEVVQQDPIV GQVKLIAEPW DVGPGGYQVG NFPPNWTEWN
410 420 430 440 450
GKYRDTVRDF WRGEPATLAE FASRITGSAD LYQDDGRKPF HSINFVTAHD
460 470 480 490 500
GFTLNDLVAY NDKHNEANGE ENRDGESHNR SWNCGIEGPT QDEKVLELRA
510 520 530 540 550
KQRRNFLATL MLSQGVPMIS HGDELGRTQQ GNNNAYCQDD EISWIDWENA
560 570 580 590 600
DEQLLEFARK LTAFRHRHQV FQRRRFFTGL PVTARGGGDP LPDLEWFTPD
610 620 630 640 650
GRPMAGDDWG NDFGRAVALF VNGEGIRERG QYGQRHVDSS FLLFFNAHDA
660 670 680 690 700
PIEFATPPAE YGEKWEKVIE TAEPSPDRPS VVEAGHKILV PDRSLIVLDR

TV
Length:702
Mass (Da):79,824
Last modified:January 15, 2008 - v1
Checksum:i3E7E6ED814913B70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF364111 Genomic DNA. Translation: ABV26724.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
EF364111 Genomic DNA. Translation: ABV26724.1.

3D structure databases

ProteinModelPortaliA8QX06.
ModBaseiSearch...
MobiDBiSearch...

Protein family/group databases

CAZyiCBM48. Carbohydrate-Binding Module Family 48.
GH13. Glycoside Hydrolase Family 13.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiView protein in InterPro
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR011837. Glycogen_debranch_GlgX.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
PfamiView protein in Pfam
PF00128. Alpha-amylase. 2 hits.
PF02922. CBM_48. 1 hit.
SMARTiView protein in SMART
SM00642. Aamy. 1 hit.
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF81296. SSF81296. 1 hit.
TIGRFAMsiTIGR02100. glgX_debranch. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiA8QX06_9ACTN
AccessioniPrimary (citable) accession number: A8QX06
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: February 15, 2017
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.