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Protein

RNA polymerase II transcription factor B subunit 2

Gene

MGL_1397

Organism
Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) (Dandruff-associated fungus)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Component of the core-TFIIH basal transcription factor involved in nucleotide excision repair (NER) of DNA.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processDNA damage, DNA repairUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
RNA polymerase II transcription factor B subunit 2UniRule annotation
Gene namesi
ORF Names:MGL_1397Imported
OrganismiMalassezia globosa (strain ATCC MYA-4612 / CBS 7966) (Dandruff-associated fungus)Imported
Taxonomic identifieri425265 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaUstilaginomycotinaMalasseziomycetesMalassezialesMalasseziaceaeMalassezia
Proteomesi
  • UP000008837 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:MGL_1397.

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

Protein-protein interaction databases

STRINGi425265.XP_001731214.1.

Family & Domainsi

Sequence similaritiesi

Belongs to the TFB2 family.UniRule annotation

Phylogenomic databases

eggNOGiKOG3471. Eukaryota.
COG5144. LUCA.
InParanoidiA8PXC1.
KOiK03144.
OrthoDBiEOG092C3703.

Family and domain databases

InterProiView protein in InterPro
IPR004598. TFIIH_p52/Tfb2.
PANTHERiPTHR13152. PTHR13152. 1 hit.
PfamiView protein in Pfam
PF03849. Tfb2. 1 hit.

Sequencei

Sequence statusi: Complete.

A8PXC1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVGSEQAASP RNTVLFLLQR AGLMQRDHQT NDKLNITSLG FQFLLQDVNS
60 70 80 90 100
QLWALLLHYL SMADERNMDL VEVLAFFFTV GGLELGRAYE SRGFSQTQLQ
110 120 130 140 150
TLEELSDYGL VYRPSKSAKY FFPTRLASTL TSTASPLLSR LNDQEEQGYL
160 170 180 190 200
ILETNYRVYA YTANLLRIAI LNLFVTLKSR LPNLVIGQLT RHSVKSALNK
210 220 230
GITADQIITY LTHHAHPQMY KNVSVKVTHS A
Length:231
Mass (Da):26,132
Last modified:January 15, 2008 - v1
Checksum:i2983DDD8C6080A9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AAYY01000004 Genomic DNA. Translation: EDP44000.1.
RefSeqiXP_001731214.1. XM_001731162.1.

Genome annotation databases

GeneIDi5855521.
KEGGimgl:MGL_1397.

Entry informationi

Entry nameiA8PXC1_MALGO
AccessioniPrimary (citable) accession number: A8PXC1
Entry historyiIntegrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: January 15, 2008
Last modified: June 7, 2017
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported