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A8PIP2

- A8PIP2_BRUMA

UniProt

A8PIP2 - A8PIP2_BRUMA

Protein
Submitted name:

Protein BM-LIG-1, isoform d

Gene

Bm-lig-1

Organism
Brugia malayi (Filarial nematode worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 42 (01 Oct 2014)
      Sequence version 2 (09 Jul 2014)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro
    3. DNA replication Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Protein BM-LIG-1, isoform dImported
    Gene namesi
    Name:Bm-lig-1Imported
    ORF Names:BM_Bm2459dImported
    OrganismiBrugia malayi (Filarial nematode worm)Imported
    Taxonomic identifieri6279 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaSpiruridaFilarioideaOnchocercidaeBrugia
    ProteomesiUP000026912: Unassembled WGS sequence

    Structurei

    3D structure databases

    ProteinModelPortaliA8PIP2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK10747.

    Family and domain databases

    Gene3Di1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProiIPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR00574. dnl1. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8PIP2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFSQLVGTTR NVENDWKTGE KIPYLCLAKT FEGIEATSSR LEIVKILASF    50
    FMKVIERTPS ELATCVYLCV NKLGPTYEGM ELGIAEGALM KAIAQATGRK 100
    IDKLKEDLNQ KGDLGLVAQM SRSNQRILFT PAPLTVTAVF HKLQDMAKTS 150
    GHMAMNKKVD MIKSLLVSCR DCEARYLIRC LSGKLRIGLA EQSILAALAN 200
    AFTDFEIKKT GEKLSCEKMK ERQAEDILLL RSTYSECPDY EKVVAAVLNG 250
    GLSKLPEKCK ITPGIPVKPM LAHPTKGIAE VLKRFGGSVF ACEFKYDGER 300
    AQIHYDSSGI KIFSRNQENN TDKYPDLKEL LKQIMDEETT SFIIDSEIVA 350
    FDPIHETILP FQILSTRKRK NVGDSEIKVK VHVFMFDLLF WNGQSLTKSP 400
    YRKRREMLQR HFKEVGGVCG FVASKDTEDT EQISEFLDDA IKGNCEGLMI 450
    KTLDVDATYE IAKRSHSWLK LKKDYLDTIG DTVDLTVIGA FFGTGKRTGV 500
    YGGYLLACYN PINEEYESIC KIGTGLTDDD LRQQHQYFEE LRIEKARPYY 550
    SYDSSLKPDV WFDPKIVWEV KAADLSISPK HFAARGIVDL EKGISLRFPR 600
    YIRRRTDKTP EEATTSQQIA DMYNNQEQIK NKVASSANDD NTDDYY 646
    Length:646
    Mass (Da):73,059
    Last modified:July 9, 2014 - v2
    Checksum:iB2087F7034D310A8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HF575152 Genomic DNA. Translation: CDQ03508.1.

    Genome annotation databases

    KEGGibmy:Bm1_26765.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HF575152 Genomic DNA. Translation: CDQ03508.1 .

    3D structure databases

    ProteinModelPortali A8PIP2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    KEGGi bmy:Bm1_26765.

    Organism-specific databases

    CTDi 6100253.

    Phylogenomic databases

    KOi K10747.

    Family and domain databases

    Gene3Di 1.10.3260.10. 1 hit.
    2.40.50.140. 1 hit.
    InterProi IPR000977. DNA_ligase_ATP-dep.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR00574. dnl1. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS00333. DNA_LIGASE_A2. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Ghedin E.
      Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiA8PIP2_BRUMA
    AccessioniPrimary (citable) accession number: A8PIP2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 15, 2008
    Last sequence update: July 9, 2014
    Last modified: October 1, 2014
    This is version 42 of the entry and version 2 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3