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A8PIP2

- A8PIP2_BRUMA

UniProt

A8PIP2 - A8PIP2_BRUMA

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Protein
Submitted name:

Protein BM-LIG-1, isoform d

Gene

Bm-lig-1

Organism
Brugia malayi (Filarial nematode worm)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA biosynthetic process Source: InterPro
  2. DNA ligation involved in DNA repair Source: InterPro
  3. DNA recombination Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein BM-LIG-1, isoform dImported
Gene namesi
Name:Bm-lig-1Imported
ORF Names:BM_Bm2459dImported
OrganismiBrugia malayi (Filarial nematode worm)Imported
Taxonomic identifieri6279 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaSpiruridaFilarioideaOnchocercidaeBrugia
ProteomesiUP000026912: Unassembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiA8PIP2.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8PIP2-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MFSQLVGTTR NVENDWKTGE KIPYLCLAKT FEGIEATSSR LEIVKILASF
60 70 80 90 100
FMKVIERTPS ELATCVYLCV NKLGPTYEGM ELGIAEGALM KAIAQATGRK
110 120 130 140 150
IDKLKEDLNQ KGDLGLVAQM SRSNQRILFT PAPLTVTAVF HKLQDMAKTS
160 170 180 190 200
GHMAMNKKVD MIKSLLVSCR DCEARYLIRC LSGKLRIGLA EQSILAALAN
210 220 230 240 250
AFTDFEIKKT GEKLSCEKMK ERQAEDILLL RSTYSECPDY EKVVAAVLNG
260 270 280 290 300
GLSKLPEKCK ITPGIPVKPM LAHPTKGIAE VLKRFGGSVF ACEFKYDGER
310 320 330 340 350
AQIHYDSSGI KIFSRNQENN TDKYPDLKEL LKQIMDEETT SFIIDSEIVA
360 370 380 390 400
FDPIHETILP FQILSTRKRK NVGDSEIKVK VHVFMFDLLF WNGQSLTKSP
410 420 430 440 450
YRKRREMLQR HFKEVGGVCG FVASKDTEDT EQISEFLDDA IKGNCEGLMI
460 470 480 490 500
KTLDVDATYE IAKRSHSWLK LKKDYLDTIG DTVDLTVIGA FFGTGKRTGV
510 520 530 540 550
YGGYLLACYN PINEEYESIC KIGTGLTDDD LRQQHQYFEE LRIEKARPYY
560 570 580 590 600
SYDSSLKPDV WFDPKIVWEV KAADLSISPK HFAARGIVDL EKGISLRFPR
610 620 630 640
YIRRRTDKTP EEATTSQQIA DMYNNQEQIK NKVASSANDD NTDDYY
Length:646
Mass (Da):73,059
Last modified:July 9, 2014 - v2
Checksum:iB2087F7034D310A8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HF575152 Genomic DNA. Translation: CDQ03508.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HF575152 Genomic DNA. Translation: CDQ03508.1 .

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Phylogenomic databases

InParanoidi A8PIP2.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Ghedin E.
    Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA8PIP2_BRUMA
AccessioniPrimary (citable) accession number: A8PIP2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: July 9, 2014
Last modified: November 26, 2014
This is version 44 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3