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A8PIP2

- A8PIP2_BRUMA

UniProt

A8PIP2 - A8PIP2_BRUMA

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Protein
Submitted name: Protein BM-LIG-1, isoform d
Gene
Bm-lig-1, BM_Bm2459d
Organism
Brugia malayi (Filarial nematode worm)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: UniProtKB-KW
  3. DNA replication Source: UniProtKB-KW
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Protein BM-LIG-1, isoform dImported
Gene namesi
Name:Bm-lig-1Imported
ORF Names:BM_Bm2459dImported
OrganismiBrugia malayi (Filarial nematode worm)Imported
Taxonomic identifieri6279 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaSpiruridaFilarioideaOnchocercidaeBrugia
ProteomesiUP000026912: Unassembled WGS sequence

Structurei

3D structure databases

ProteinModelPortaliA8PIP2.

Family & Domainsi

Phylogenomic databases

KOiK10747.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8PIP2-1 [UniParc]FASTAAdd to Basket

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MFSQLVGTTR NVENDWKTGE KIPYLCLAKT FEGIEATSSR LEIVKILASF    50
FMKVIERTPS ELATCVYLCV NKLGPTYEGM ELGIAEGALM KAIAQATGRK 100
IDKLKEDLNQ KGDLGLVAQM SRSNQRILFT PAPLTVTAVF HKLQDMAKTS 150
GHMAMNKKVD MIKSLLVSCR DCEARYLIRC LSGKLRIGLA EQSILAALAN 200
AFTDFEIKKT GEKLSCEKMK ERQAEDILLL RSTYSECPDY EKVVAAVLNG 250
GLSKLPEKCK ITPGIPVKPM LAHPTKGIAE VLKRFGGSVF ACEFKYDGER 300
AQIHYDSSGI KIFSRNQENN TDKYPDLKEL LKQIMDEETT SFIIDSEIVA 350
FDPIHETILP FQILSTRKRK NVGDSEIKVK VHVFMFDLLF WNGQSLTKSP 400
YRKRREMLQR HFKEVGGVCG FVASKDTEDT EQISEFLDDA IKGNCEGLMI 450
KTLDVDATYE IAKRSHSWLK LKKDYLDTIG DTVDLTVIGA FFGTGKRTGV 500
YGGYLLACYN PINEEYESIC KIGTGLTDDD LRQQHQYFEE LRIEKARPYY 550
SYDSSLKPDV WFDPKIVWEV KAADLSISPK HFAARGIVDL EKGISLRFPR 600
YIRRRTDKTP EEATTSQQIA DMYNNQEQIK NKVASSANDD NTDDYY 646
Length:646
Mass (Da):73,059
Last modified:July 9, 2014 - v2
Checksum:iB2087F7034D310A8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HF575152 Genomic DNA. Translation: CDQ03508.1.

Genome annotation databases

KEGGibmy:Bm1_26765.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HF575152 Genomic DNA. Translation: CDQ03508.1 .

3D structure databases

ProteinModelPortali A8PIP2.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

KEGGi bmy:Bm1_26765.

Organism-specific databases

CTDi 6100253.

Phylogenomic databases

KOi K10747.

Family and domain databases

Gene3Di 1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProi IPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR00574. dnl1. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Ghedin E.
    Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiA8PIP2_BRUMA
AccessioniPrimary (citable) accession number: A8PIP2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: July 9, 2014
Last modified: September 3, 2014
This is version 41 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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