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Protein
Submitted name:

Oxoglutarate dehydrogenase

Gene

CC1G_12439

Organism
Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Inky cap fungus) (Hormographiella aspergillata)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Oxoglutarate dehydrogenaseImported
Gene namesi
ORF Names:CC1G_12439Imported
OrganismiCoprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Inky cap fungus) (Hormographiella aspergillata)Imported
Taxonomic identifieri240176 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaBasidiomycotaAgaricomycotinaAgaricomycetesAgaricomycetidaeAgaricalesPsathyrellaceaeCoprinopsis
ProteomesiUP000001861 Componenti: Unassembled WGS sequence

Organism-specific databases

EuPathDBiFungiDB:CC1G_12439.

Interactioni

Protein-protein interaction databases

STRINGi240176.XP_001836087.2.

Structurei

3D structure databases

ProteinModelPortaliA8NST1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiA8NST1.
KOiK00164.
OrthoDBiEOG72G1GM.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.

Sequencei

Sequence statusi: Complete.

A8NST1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTRPVARGF SAPLPRQFRG LVARGNLRPF ATPAAAPPSP NDPFANGTNS
60 70 80 90 100
YYADEMYRLW KQDPKSVHAS WDVYFSGMEK GLPSHKAFTP PPSHFPHPTD
110 120 130 140 150
GAPPLHISAS GTELDLHLKV QLLVRAYQVR GHHVAELDPL GILDADLADV
160 170 180 190 200
KPPELELSRY GFTERDLDKE VTLGPGILPH FATEEHKTMK LRDIIKLCKR
210 220 230 240 250
IYCGAVGIQY VHIPDKEQCD WIRARVEVPK PWNYTVDEKR MILDRLIWSE
260 270 280 290 300
SFEKFMASKY PNEKRFGLEG CEALIPGMKA LIDRSVDHGV KHITIGMPHR
310 320 330 340 350
GRLNVLANVV RKPIEAILNE FSGDEDDNWP AGDVKYHLGA NYVRPTPSGK
360 370 380 390 400
KVSLSLVANP SHLEAADPVV LGKTRAIQHF ENDETTHKTA MGVLLHGDAA
410 420 430 440 450
FAGQGVVYET MGLHNLPSYG TGGTIHLIVN NQIGFTTDPR FSRSTPYPSD
460 470 480 490 500
IAKSIDAPIF HVNGDNIEAV NFVCQLAADY RAKWKKDVVI DIVCYRRYGH
510 520 530 540 550
NETDQPSFTQ PRMYEAIKKQ PTPLTQYAKF LVNRGTFTER DIEEHKKWVW
560 570 580 590 600
GMLEKAAAAS KDYVPTSKEW LSAAWQGFPS PKQLAEKTLP TRPTGSDEET
610 620 630 640 650
LKRIGKVISS FPTGFTPHRN LARILGGRSK AVEEGTGIDW ATAEALAFGS
660 670 680 690 700
LALEKIHVRV SGQDVERGTF SQRHAVIHDQ VNEQQYVPLN NLGSSQAKFV
710 720 730 740 750
VCNSSLSEFG ALGFELGYSL VSPDALTIWE AQFGDFANNA QCIIDQFIAA
760 770 780 790 800
GERKWLQRTG LVVNLPHGYD GQGPEHSSGR IERFLQLCDD HPNQFPSPEK
810 820 830 840 850
IERQHQDCNM QVVYPTTPAN YFHVLRRQIH RDFRKPLIVF FSKSLLRHPR
860 870 880 890 900
AKSDLSEFVG ETNFQRYIPE PFEEGLVAPE EIKRHILCTG QVYHTLLQAR
910 920 930 940 950
EERGIKDVAI SRIEQISPFP YDMITPHLDK YPNAGLMWCQ EEPLNNGAWS
960 970 980 990 1000
YVGPRIYTAA GQTQHHKGKY PLYAGREPTS SVATGSKMQH KKEIEAFVNA

AFNLD
Length:1,005
Mass (Da):112,873
Last modified:August 10, 2010 - v2
Checksum:i3FBAE96AC8EB3102
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACS02000008 Genomic DNA. Translation: EAU85723.2.
RefSeqiXP_001836087.2. XM_001836035.2.

Genome annotation databases

GeneIDi6012633.
KEGGicci:CC1G_12439.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACS02000008 Genomic DNA. Translation: EAU85723.2.
RefSeqiXP_001836087.2. XM_001836035.2.

3D structure databases

ProteinModelPortaliA8NST1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi240176.XP_001836087.2.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi6012633.
KEGGicci:CC1G_12439.

Organism-specific databases

EuPathDBiFungiDB:CC1G_12439.

Phylogenomic databases

InParanoidiA8NST1.
KOiK00164.
OrthoDBiEOG72G1GM.

Family and domain databases

Gene3Di3.40.50.970. 2 hits.
InterProiIPR011603. 2oxoglutarate_DH_E1.
IPR001017. DH_E1.
IPR029061. THDP-binding.
IPR005475. Transketolase-like_Pyr-bd.
[Graphical view]
PANTHERiPTHR23152. PTHR23152. 1 hit.
PfamiPF00676. E1_dh. 1 hit.
PF02779. Transket_pyr. 1 hit.
[Graphical view]
PIRSFiPIRSF000157. Oxoglu_dh_E1. 1 hit.
SMARTiSM00861. Transket_pyr. 1 hit.
[Graphical view]
SUPFAMiSSF52518. SSF52518. 2 hits.
TIGRFAMsiTIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)."
    Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., Borodovsky M., Burns C., Canback B., Casselton L.A., Cheng C.K., Deng J., Dietrich F.S., Fargo D.C., Farman M.L., Gathman A.C., Goldberg J., Guigo R., Hoegger P.J.
    , Hooker J.B., Huggins A., James T.Y., Kamada T., Kilaru S., Kodira C., Kues U., Kupfer D., Kwan H.S., Lomsadze A., Li W., Lilly W.W., Ma L.J., Mackey A.J., Manning G., Martin F., Muraguchi H., Natvig D.O., Palmerini H., Ramesh M.A., Rehmeyer C.J., Roe B.A., Shenoy N., Stanke M., Ter-Hovhannisyan V., Tunlid A., Velagapudi R., Vision T.J., Zeng Q., Zolan M.E., Pukkila P.J.
    Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003Imported.

Entry informationi

Entry nameiA8NST1_COPC7
AccessioniPrimary (citable) accession number: A8NST1
Entry historyi
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: August 10, 2010
Last modified: June 24, 2015
This is version 32 of the entry and version 2 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.