A8N319 (A8N319_COPC7) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP-dependent RNA helicase DHX8 EMBL EAU92580.2

Gene names

ORF Names:

CC1G_06591 EMBL EAU92580.2

Organism

Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Inky cap fungus) (Hormographiella aspergillata) [Reference proteome] EMBL EAU92580.2

Taxonomic identifier

240176 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Basidiomycota › Agaricomycotina › Agaricomycetes › Agaricomycetidae › Agaricales › Psathyrellaceae › Coprinopsis › Coprinopsis cinerea

Protein attributes

Sequence length	1160 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities	Contains 1 helicase ATP-binding domain. SAAS SAAS007502 Contains 1 helicase C-terminal domain. SAAS SAAS007502
Caution	The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Ontologies

Keywords
Ligand	ATP-binding Nucleotide-binding
Molecular function	Helicase RuleBase RU000452 EMBL EAU92580.2 Hydrolase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Molecular_function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW ATP-dependent helicase activity Inferred from electronic annotation. Source: InterPro RNA binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8N319 [UniParc]. Last modified August 10, 2010. Version 2. Checksum: 5766E51B77F2FF82	FASTA	1,160	130,280
	10 20 30 40 50 60 MATDDLYNLE FLSLVAKITQ EINSHLGIND KTVAEFIIDL HDQCKANLTE FKKKLHEMEA 70 80 90 100 110 120 GFTDSNIENI DRLILTMHPK HKKARKSKKE AKGEKEDGDV LDEQEKTRRL FPGLAIQNKE 130 140 150 160 170 180 PPPAVDDDVF LKELGDIVSG KKTRQTSHSE EPPAKRQRRS RSPSPYRGRS PGRGGYDRRD 190 200 210 220 230 240 RDDRYDRRPG RAQLDERPVV FKIYEGKVAG IKDFGAFVQL EGVAGRVEGM VHVSNIQAGA 250 260 270 280 290 300 RANSAADLLS RGQRVKVKVM SVAGGRIGLS MKDVDQVTGR DLTPHLRIKS EAEMEEERAR 310 320 330 340 350 360 AARASSGANA LPLNSKDDKP VRSTKRLTSP ERWELKQLIS SGALNPADYP ELEEDLHDPI 370 380 390 400 410 420 ARAEVEEELD VEIREDEPPF LAGQTKRTLD LSPVKIVKAP DGSLNRAALA GAALAKERRE 430 440 450 460 470 480 LRQQEANEEA DSQARDFSQP WLDPMSKEGD KLFAQDLRGN LRSQKASEVP SWKQSSFNKA 490 500 510 520 530 540 TTFGEITTLS IQEQRRSLPI YKLRDPLLKA VEEHQVLIVV GDTGSGKTTQ MVQYLAEAGY 550 560 570 580 590 600 ADKGRIGCTQ PRRVAAMSVA KRVAEEVGCR LGQEVGYTIR FEDCTSPETR IKYMTDGMLQ 610 620 630 640 650 660 RECLIDPLCS QYSVIMLDEA HERTIATDVL FGLLKKAVKK RPDLKLIVTS ATLDAEKFSK 670 680 690 700 710 720 YFFGCPIFTI PGRTYPVEIL YTKEPESDYL DASLITVMQI HLSEPPGDIL LFLTGQEEID 730 740 750 760 770 780 TACEILFERM KALGPKVPEL IILPIYSALP SEVQSRVFEP TPPGARKVVI ATNVAETSLT 790 800 810 820 830 840 IPGIYYVIDP GFSKQNAYDP RLGMDSLVVM PISQAQARQR AGRAGRTGPG KCYRLYTEAA 850 860 870 880 890 900 FRNEMLPNSI PDIQRTNLSA TILQLKAMGI NDLLSFDFMD PPPAQTMLTA LEGLYALSAL 910 920 930 940 950 960 DDEGLLTRLG RKMADFPMEP PLAKMLIASV ELGCSEEILS IVAMLSVQSV FYRPKEKQAQ 970 980 990 1000 1010 1020 ADSKKAKFHQ PEGDHLTLLT VYNGWKAANF SNPWCYENFI QARSMRRAQD VRKQLLGIMD 1030 1040 1050 1060 1070 1080 RYKHDILSAG RDYNKVRKAI CSGFFRNAAK KDPQEGYKTL VEGTPVYIHP SSALFNRAPE 1090 1100 1110 1120 1130 1140 WLVYHELVLT TREYCHNVTV VEPKWLVEVA PQFFKVADAN KISKRKKQEK IEPLYNKYEK 1150 1160 PDEWRLSKIK RSARSSQTFG

References

[1]

"Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)." Stajich J.E., Wilke S.K., Ahren D., Au C.H., Birren B.W., Borodovsky M., Burns C., Canbaeck B., Casselton L.A., Cheng C.K., Deng J., Dietrich F.S., Fargo D.C., Farman M.L., Gathman A.C., Goldberg J., Guigo R., Hoegger P.J. , Hooker J.B., Huggins A., James T.Y., Kamada T., Kilaru S., Kodira C., Kuees U., Kupfer D., Kwan H.S., Lomsadze A., Li W., Lilly W.W., Ma L.-J., Mackey A.J., Manning G., Martin F., Muraguchi H., Natvig D.O., Palmerini H., Ramesh M.A., Rehmeyer C.J., Roe B.A., Shenoy N., Stanke M., Ter-Hovhannisyan V., Tunlid A., Velagapudi R., Vision T.J., Zeng Q., Zolan M.E., Pukkila P.J. Proc. Natl. Acad. Sci. U.S.A. 107:11889-11894(2010) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AACS02000001 Genomic DNA. Translation: EAU92580.2.
RefSeq	XP_001829254.2. XM_001829202.2.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	6005681.
KEGG	cci:CC1G_06591.
Phylogenomic databases
KO	K12818.
OrthoDB	EOG45TGW9.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR011545. DNA/RNA_helicase_DEAD/DEAH_N. IPR002464. DNA/RNA_helicase_DEAH_CS. IPR011709. DUF1605. IPR007502. Helicase-assoc_dom. IPR014001. Helicase_ATP-bd. IPR001650. Helicase_C. IPR012340. NA-bd_OB-fold. IPR003029. Rbsml_prot_S1_RNA-bd_dom. IPR022967. RNA-binding_domain_S1. [Graphical view]
Pfam	PF00270. DEAD. 1 hit. PF04408. HA2. 1 hit. PF00271. Helicase_C. 1 hit. PF07717. OB_NTP_bind. 1 hit. PF00575. S1. 1 hit. [Graphical view]
SMART	SM00487. DEXDc. 1 hit. SM00847. HA2. 1 hit. SM00490. HELICc. 1 hit. SM00316. S1. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00690. DEAH_ATP_HELICASE. 1 hit. PS51192. HELICASE_ATP_BIND_1. 1 hit. PS51194. HELICASE_CTER. 1 hit. PS50126. S1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8N319_COPC7

Accession

Primary (citable) accession number: A8N319

Entry history

Integrated into UniProtKB/TrEMBL:	January 15, 2008
Last sequence update:	August 10, 2010
Last modified:	March 6, 2013
This is version 31 of the entry and version 2 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)