Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

A8N1F0 (A8N1F0_COPC7) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 38. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length803 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).

Sequence similarities

Belongs to the ATP-dependent DNA ligase family. RuleBase RU004196

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Sequences

Sequence LengthMass (Da)Tools
A8N1F0 [UniParc].

Last modified August 10, 2010. Version 2.
Checksum: FD46F5CAEF3ED909

FASTA80389,259
        10         20         30         40         50         60 
MGRQQTLGKF FEMPKSMKPA PPQQSSLTEM WGKKRDVSTK SAPKKEEDAM EVDLKQEAQA 

        70         80         90        100        110        120 
GPSKRKESAL ETKNSPKVKK RRIIESSDEE DEVASRASQS IATSSRHVTP EPSEAASSSP 

       130        140        150        160        170        180 
VKKHVEGSRA VKPPHSDIDE ESIAASEPEA DEDRDDVLLE DDEELNPVGG TESKSARAAL 

       190        200        210        220        230        240 
LKKDEVDIKG GWKVGQPVPY AALAKTFSLI EATTKRLEKN AILTAFLLLV IQRSAKDDHK 

       250        260        270        280        290        300 
SLLQAVYLCI NRLSPDYVGI ELGIGESLLI KAIAESTGRS LAVIKADLKK EGDLGLVAMN 

       310        320        330        340        350        360 
SKNSQKTLFK PKPLTLPFVF TQLKDIALTT GNASQAKKVA LRANFALERR AICTGFSRTA 

       370        380        390        400        410        420 
AVLAERERAD KKWSQDKLTA RLEEGAEIMK AVYSELPSYD SVVPALLEGG IKGLRERCKL 

       430        440        450        460        470        480 
TPGIPLKPML AKPTKAIGEV LDRFENKRFT CEYKYDGERA QIHRLDDGTV GVFSRNSEDM 

       490        500        510        520        530        540 
SKKYPDLVDQ LSKCIKKNTK SFVLDSEAVA IDRTTGKLMP FQELSRRKRK DVKVEDIQVR 

       550        560        570        580        590        600 
VCIFAFDLLY LNGEPLINKP LVERRDLLRK HFQVVPGEFD FAKSSDGEST DEIQTFLEES 

       610        620        630        640        650        660 
VKDGCEGLMV KMLESDASNY EPSRRSVNWL KLKKDYLAGV GDSLDLVVVG AYYGKGKRTN 

       670        680        690        700        710        720 
YYGAFLLACY DADSEEYQTI CKIGTGFSDE ALQTHYETLK PLEQTKPRGD IKIGGAKPDI 

       730        740        750        760        770        780 
WFEPKVVWEV LTADLSLSPI YTAAQGLVEE RGISLRFPRF IRVRDDKDAD DATAPEQIAE 

       790        800 
MYERQSLAQA GSKKKGGDDD GFW 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AACS02000001 Genomic DNA. Translation: EAU93094.2.
RefSeqXP_001828699.2. XM_001828647.2.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID6005130.
KEGGcci:CC1G_11289.

Phylogenomic databases

KOK10747.
OrthoDBEOG7TXKRG.

Family and domain databases

Gene3D1.10.3260.10. 2 hits.
2.40.50.140. 1 hit.
InterProIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR00574. dnl1. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8N1F0_COPC7
AccessionPrimary (citable) accession number: A8N1F0
Entry history
Integrated into UniProtKB/TrEMBL: January 15, 2008
Last sequence update: August 10, 2010
Last modified: November 13, 2013
This is version 38 of the entry and version 2 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)