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A8MYZ5

- IQCF6_HUMAN

UniProt

A8MYZ5 - IQCF6_HUMAN

Protein

IQ domain-containing protein F6

Gene

IQCF6

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
  1. Names & Taxonomyi

    Protein namesi
    Recommended name:
    IQ domain-containing protein F6
    Gene namesi
    Name:IQCF6
    OrganismiHomo sapiens (Human)
    Taxonomic identifieri9606 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
    ProteomesiUP000005640: Chromosome 3

    Organism-specific databases

    HGNCiHGNC:35158. IQCF6.

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 107107IQ domain-containing protein F6PRO_0000343226Add
    BLAST

    Proteomic databases

    PaxDbiA8MYZ5.
    PRIDEiA8MYZ5.

    PTM databases

    PhosphoSiteiA8MYZ5.

    Expressioni

    Gene expression databases

    BgeeiA8MYZ5.
    GenevestigatoriA8MYZ5.

    Interactioni

    Protein-protein interaction databases

    STRINGi9606.ENSP00000381760.

    Structurei

    3D structure databases

    ProteinModelPortaliA8MYZ5.
    SMRiA8MYZ5. Positions 9-69.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini42 – 7130IQPROSITE-ProRule annotationAdd
    BLAST

    Sequence similaritiesi

    Contains 1 IQ domain.PROSITE-ProRule annotation

    Keywords - Domaini

    Repeat

    Phylogenomic databases

    eggNOGiNOG284619.
    HOGENOMiHOG000060238.
    OMAiHRETRNT.
    OrthoDBiEOG7KSXB8.
    PhylomeDBiA8MYZ5.
    TreeFamiTF337908.

    Family and domain databases

    InterProiIPR000048. IQ_motif_EF-hand-BS.
    [Graphical view]
    PfamiPF00612. IQ. 2 hits.
    [Graphical view]
    SMARTiSM00015. IQ. 1 hit.
    [Graphical view]
    PROSITEiPS50096. IQ. 2 hits.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8MYZ5-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVRRTLLQAA LRAWVIQCWW RSMQAKMLEQ RRRLALRLYT CQEWAVVKVQ    50
    AQVRMWQARR RFLQARQAAC IIQSHWRWHA SQTRGLIRGH YEVRASRLEL 100
    DIEILMT 107
    Length:107
    Mass (Da):13,059
    Last modified:February 19, 2014 - v3
    Checksum:i4B822CE61AA52CDA
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC099050 Genomic DNA. No translation available.
    CCDSiCCDS54590.1.
    RefSeqiNP_001137305.2. NM_001143833.3.
    UniGeneiHs.444316.

    Genome annotation databases

    EnsembliENST00000398780; ENSP00000381760; ENSG00000214686.
    GeneIDi440956.
    KEGGihsa:440956.
    UCSCiuc011bdv.2. human.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC099050 Genomic DNA. No translation available.
    CCDSi CCDS54590.1.
    RefSeqi NP_001137305.2. NM_001143833.3.
    UniGenei Hs.444316.

    3D structure databases

    ProteinModelPortali A8MYZ5.
    SMRi A8MYZ5. Positions 9-69.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 9606.ENSP00000381760.

    PTM databases

    PhosphoSitei A8MYZ5.

    Proteomic databases

    PaxDbi A8MYZ5.
    PRIDEi A8MYZ5.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENST00000398780 ; ENSP00000381760 ; ENSG00000214686 .
    GeneIDi 440956.
    KEGGi hsa:440956.
    UCSCi uc011bdv.2. human.

    Organism-specific databases

    CTDi 440956.
    GeneCardsi GC03M051788.
    HGNCi HGNC:35158. IQCF6.
    neXtProti NX_A8MYZ5.
    GenAtlasi Search...

    Phylogenomic databases

    eggNOGi NOG284619.
    HOGENOMi HOG000060238.
    OMAi HRETRNT.
    OrthoDBi EOG7KSXB8.
    PhylomeDBi A8MYZ5.
    TreeFami TF337908.

    Gene expression databases

    Bgeei A8MYZ5.
    Genevestigatori A8MYZ5.

    Family and domain databases

    InterProi IPR000048. IQ_motif_EF-hand-BS.
    [Graphical view ]
    Pfami PF00612. IQ. 2 hits.
    [Graphical view ]
    SMARTi SM00015. IQ. 1 hit.
    [Graphical view ]
    PROSITEi PS50096. IQ. 2 hits.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The DNA sequence, annotation and analysis of human chromosome 3."
      Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
      , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
      Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

    Entry informationi

    Entry nameiIQCF6_HUMAN
    AccessioniPrimary (citable) accession number: A8MYZ5
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 1, 2008
    Last sequence update: February 19, 2014
    Last modified: October 1, 2014
    This is version 42 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program
    DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Human chromosome 3
      Human chromosome 3: entries, gene names and cross-references to MIM
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3