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Protein

IQ domain-containing protein F6

Gene

IQCF6

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
IQ domain-containing protein F6
Gene namesi
Name:IQCF6
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640 Componenti: Chromosome 3

Organism-specific databases

HGNCiHGNC:35158. IQCF6.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 107107IQ domain-containing protein F6PRO_0000343226Add
BLAST

Proteomic databases

PaxDbiA8MYZ5.
PRIDEiA8MYZ5.

PTM databases

PhosphoSiteiA8MYZ5.

Expressioni

Gene expression databases

BgeeiA8MYZ5.
GenevestigatoriA8MYZ5.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000381760.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini42 – 7130IQPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Contains 1 IQ domain.PROSITE-ProRule annotation

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiNOG284619.
GeneTreeiENSGT00390000004641.
HOGENOMiHOG000060238.
InParanoidiA8MYZ5.
OMAiCQEWAVV.
OrthoDBiEOG7KSXB8.
PhylomeDBiA8MYZ5.
TreeFamiTF337908.

Family and domain databases

InterProiIPR000048. IQ_motif_EF-hand-BS.
[Graphical view]
PfamiPF00612. IQ. 2 hits.
[Graphical view]
SMARTiSM00015. IQ. 1 hit.
[Graphical view]
PROSITEiPS50096. IQ. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8MYZ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVRRTLLQAA LRAWVIQCWW RSMQAKMLEQ RRRLALRLYT CQEWAVVKVQ
60 70 80 90 100
AQVRMWQARR RFLQARQAAC IIQSHWRWHA SQTRGLIRGH YEVRASRLEL

DIEILMT
Length:107
Mass (Da):13,059
Last modified:February 19, 2014 - v3
Checksum:i4B822CE61AA52CDA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC099050 Genomic DNA. No translation available.
CCDSiCCDS54590.1.
RefSeqiNP_001137305.2. NM_001143833.3.
UniGeneiHs.444316.

Genome annotation databases

EnsembliENST00000398780; ENSP00000381760; ENSG00000214686.
GeneIDi440956.
KEGGihsa:440956.
UCSCiuc011bdv.2. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC099050 Genomic DNA. No translation available.
CCDSiCCDS54590.1.
RefSeqiNP_001137305.2. NM_001143833.3.
UniGeneiHs.444316.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000381760.

PTM databases

PhosphoSiteiA8MYZ5.

Proteomic databases

PaxDbiA8MYZ5.
PRIDEiA8MYZ5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000398780; ENSP00000381760; ENSG00000214686.
GeneIDi440956.
KEGGihsa:440956.
UCSCiuc011bdv.2. human.

Organism-specific databases

CTDi440956.
GeneCardsiGC03M051788.
HGNCiHGNC:35158. IQCF6.
neXtProtiNX_A8MYZ5.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG284619.
GeneTreeiENSGT00390000004641.
HOGENOMiHOG000060238.
InParanoidiA8MYZ5.
OMAiCQEWAVV.
OrthoDBiEOG7KSXB8.
PhylomeDBiA8MYZ5.
TreeFamiTF337908.

Miscellaneous databases

GenomeRNAii440956.
PROiA8MYZ5.

Gene expression databases

BgeeiA8MYZ5.
GenevestigatoriA8MYZ5.

Family and domain databases

InterProiIPR000048. IQ_motif_EF-hand-BS.
[Graphical view]
PfamiPF00612. IQ. 2 hits.
[Graphical view]
SMARTiSM00015. IQ. 1 hit.
[Graphical view]
PROSITEiPS50096. IQ. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The DNA sequence, annotation and analysis of human chromosome 3."
    Muzny D.M., Scherer S.E., Kaul R., Wang J., Yu J., Sudbrak R., Buhay C.J., Chen R., Cree A., Ding Y., Dugan-Rocha S., Gill R., Gunaratne P., Harris R.A., Hawes A.C., Hernandez J., Hodgson A.V., Hume J.
    , Jackson A., Khan Z.M., Kovar-Smith C., Lewis L.R., Lozado R.J., Metzker M.L., Milosavljevic A., Miner G.R., Morgan M.B., Nazareth L.V., Scott G., Sodergren E., Song X.-Z., Steffen D., Wei S., Wheeler D.A., Wright M.W., Worley K.C., Yuan Y., Zhang Z., Adams C.Q., Ansari-Lari M.A., Ayele M., Brown M.J., Chen G., Chen Z., Clendenning J., Clerc-Blankenburg K.P., Chen R., Chen Z., Davis C., Delgado O., Dinh H.H., Dong W., Draper H., Ernst S., Fu G., Gonzalez-Garay M.L., Garcia D.K., Gillett W., Gu J., Hao B., Haugen E., Havlak P., He X., Hennig S., Hu S., Huang W., Jackson L.R., Jacob L.S., Kelly S.H., Kube M., Levy R., Li Z., Liu B., Liu J., Liu W., Lu J., Maheshwari M., Nguyen B.-V., Okwuonu G.O., Palmeiri A., Pasternak S., Perez L.M., Phelps K.A., Plopper F.J., Qiang B., Raymond C., Rodriguez R., Saenphimmachak C., Santibanez J., Shen H., Shen Y., Subramanian S., Tabor P.E., Verduzco D., Waldron L., Wang J., Wang J., Wang Q., Williams G.A., Wong G.K.-S., Yao Z., Zhang J., Zhang X., Zhao G., Zhou J., Zhou Y., Nelson D., Lehrach H., Reinhardt R., Naylor S.L., Yang H., Olson M., Weinstock G., Gibbs R.A.
    Nature 440:1194-1198(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiIQCF6_HUMAN
AccessioniPrimary (citable) accession number: A8MYZ5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 1, 2008
Last sequence update: February 19, 2014
Last modified: April 29, 2015
This is version 46 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.