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Protein

Tetratricopeptide repeat protein 34

Gene

TTC34

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Tetratricopeptide repeat protein 34
Short name:
TPR repeat protein 34
Gene namesi
Name:TTC34
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000215912.11.
HGNCiHGNC:34297. TTC34.

Pathology & Biotechi

Organism-specific databases

DisGeNETi100287898.
OpenTargetsiENSG00000215912.
PharmGKBiPA162407211.

Polymorphism and mutation databases

BioMutaiTTC34.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003412781 – 566Tetratricopeptide repeat protein 34Add BLAST566

Proteomic databases

PaxDbiA8MYJ7.
PRIDEiA8MYJ7.

PTM databases

PhosphoSitePlusiA8MYJ7.

Expressioni

Gene expression databases

BgeeiENSG00000215912.
CleanExiHS_TTC34.
ExpressionAtlasiA8MYJ7. baseline and differential.

Organism-specific databases

HPAiHPA066832.

Interactioni

Protein-protein interaction databases

BioGridi939557. 1 interactor.
STRINGi9606.ENSP00000383873.

Structurei

3D structure databases

ProteinModelPortaliA8MYJ7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati50 – 83TPR 1Add BLAST34
Repeati178 – 211TPR 2Add BLAST34
Repeati212 – 245TPR 3Add BLAST34
Repeati306 – 339TPR 4Add BLAST34
Repeati341 – 373TPR 5Add BLAST33
Repeati424 – 457TPR 6Add BLAST34
Repeati464 – 497TPR 7Add BLAST34
Repeati512 – 545TPR 8Add BLAST34

Keywords - Domaini

Repeat, TPR repeat

Phylogenomic databases

eggNOGiENOG410IE0N. Eukaryota.
ENOG410ZKC0. LUCA.
GeneTreeiENSGT00390000003047.
HOGENOMiHOG000154706.
HOVERGENiHBG108612.
InParanoidiA8MYJ7.
OrthoDBiEOG091G01H4.
PhylomeDBiA8MYJ7.
TreeFamiTF332803.

Family and domain databases

Gene3Di1.25.40.10. 5 hits.
InterProiView protein in InterPro
IPR013026. TPR-contain_dom.
IPR011990. TPR-like_helical_dom.
IPR019734. TPR_repeat.
SMARTiView protein in SMART
SM00028. TPR. 7 hits.
SUPFAMiSSF48452. SSF48452. 3 hits.
PROSITEiView protein in PROSITE
PS50005. TPR. 6 hits.
PS50293. TPR_REGION. 4 hits.

Sequencei

Sequence statusi: Complete.

A8MYJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLQRSPRAGP SRAQGRREAA ETGGPTTQEG VACGVHQLAT LLMELDSEDE
60 70 80 90 100
ASRLLAADAL YRLGRLEETH KALLVALSRR PQAAPVLARL ALLQLRRGFF
110 120 130 140 150
YDANQLVKKL VQSGDTACLQ PTLDVFCHED RQLLQGHCHA RALAILRARP
160 170 180 190 200
GGADGRVHTK EAIAYLSLAI FAAGSQASES LLARARCYGF LGQKKTAMFD
210 220 230 240 250
FNTVLRAEPG NVQALCGRAL VHLALDQLQE AVDDIVSALK LGPGTVVPEL
260 270 280 290 300
RSLKPEAQAL ITQGLYSHCR ALLSQLPDTG APLEDKDTQG LLAVGEALIK
310 320 330 340 350
IDSGQPHWHL LLADILMAQG SYEEAGTHLE KALHRAPTSE AARARLGLLQ
360 370 380 390 400
LKKGDVPGAA RDLQSLAEVD APDLSCLLHL LEASERQSLA QAAAQEAGTL
410 420 430 440 450
LDAGQPRQAL GYCSLSVLAS GSSACHLRLR ATCLAELQEF GRALRDLDHV
460 470 480 490 500
LQEALGDGDL PRRAEDFCRQ GRLLLSLGDE AAAAGAFAQA LKLAPSLAQN
510 520 530 540 550
SLCRQPGRAP TARMFLLRGQ CCLEEQRHAE AWTAVESGLL VDPDHRGLKR
560
LKARIRREAS SGCWLQ
Length:566
Mass (Da):60,903
Last modified:June 10, 2008 - v2
Checksum:i6668E05E87DC3E73
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL592464 Genomic DNA. No translation available.
AL831784 Genomic DNA. No translation available.
DN831537 mRNA. No translation available.
DN831538 mRNA. No translation available.
DY655627 mRNA. No translation available.
CCDSiCCDS55565.1.
RefSeqiNP_001229601.1. NM_001242672.1.
XP_016855479.1. XM_016999990.1.
UniGeneiHs.632363.

Genome annotation databases

EnsembliENST00000611612; ENSP00000483029; ENSG00000275571.
ENST00000637179; ENSP00000490537; ENSG00000215912.
GeneIDi100287898.
KEGGihsa:100287898.
UCSCiuc021oey.2. human.

Similar proteinsi

Entry informationi

Entry nameiTTC34_HUMAN
AccessioniPrimary (citable) accession number: A8MYJ7
Secondary accession number(s): A8MXL8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: June 10, 2008
Last modified: October 25, 2017
This is version 89 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 1
    Human chromosome 1: entries, gene names and cross-references to MIM