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Protein

Uncharacterized protein C17orf98

Gene

C17orf98

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17orf98
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 17, UP000005640: Unplaced

Organism-specific databases

HGNCiHGNC:34492. C17orf98.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162378591.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 154154Uncharacterized protein C17orf98PRO_0000340710Add
BLAST

Proteomic databases

PaxDbiA8MV24.
PRIDEiA8MV24.

Expressioni

Gene expression databases

BgeeiA8MV24.
GenevestigatoriA8MV24.

Organism-specific databases

HPAiHPA051696.

Structurei

3D structure databases

ProteinModelPortaliA8MV24.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG26781.
GeneTreeiENSGT00390000004450.
HOGENOMiHOG000007685.
HOVERGENiHBG098397.
InParanoidiA8MV24.
OMAiIVDYFHI.
OrthoDBiEOG7G4QHH.
PhylomeDBiA8MV24.
TreeFamiTF338072.

Family and domain databases

InterProiIPR028027. DUF4542.
[Graphical view]
PfamiPF15075. DUF4542. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8MV24-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAYLSECRLR LEKGFILDGV AVSTAARAYG RSRPKLWSAI PPYNAQQDYH
60 70 80 90 100
ARSYFQSHVV PPLLRKTDQD HGGTGRDGWI VDYIHIFGQG QRYLNRRNWA
110 120 130 140 150
GTGHSLQQVT GHDHYNADLK PIDGFNGRFG YRRNTPALRQ STSVFGEVTH

FPLF
Length:154
Mass (Da):17,565
Last modified:December 4, 2007 - v1
Checksum:i8F1BAD4B79026747
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti61 – 611P → L.
Corresponds to variant rs7210156 [ dbSNP | Ensembl ].
VAR_044022

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006449 Genomic DNA. No translation available.
CH471152 Genomic DNA. Translation: EAW60538.1.
CCDSiCCDS42310.1.
RefSeqiNP_001073934.1. NM_001080465.2.
UniGeneiHs.250182.

Genome annotation databases

EnsembliENST00000614158; ENSP00000479396; ENSG00000275489.
ENST00000619585; ENSP00000482299; ENSG00000276913.
GeneIDi388381.
KEGGihsa:388381.
UCSCiuc002hqv.2. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006449 Genomic DNA. No translation available.
CH471152 Genomic DNA. Translation: EAW60538.1.
CCDSiCCDS42310.1.
RefSeqiNP_001073934.1. NM_001080465.2.
UniGeneiHs.250182.

3D structure databases

ProteinModelPortaliA8MV24.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiA8MV24.
PRIDEiA8MV24.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000614158; ENSP00000479396; ENSG00000275489.
ENST00000619585; ENSP00000482299; ENSG00000276913.
GeneIDi388381.
KEGGihsa:388381.
UCSCiuc002hqv.2. human.

Organism-specific databases

CTDi388381.
GeneCardsiGC17M036991.
HGNCiHGNC:34492. C17orf98.
HPAiHPA051696.
neXtProtiNX_A8MV24.
PharmGKBiPA162378591.
GenAtlasiSearch...

Phylogenomic databases

eggNOGiNOG26781.
GeneTreeiENSGT00390000004450.
HOGENOMiHOG000007685.
HOVERGENiHBG098397.
InParanoidiA8MV24.
OMAiIVDYFHI.
OrthoDBiEOG7G4QHH.
PhylomeDBiA8MV24.
TreeFamiTF338072.

Miscellaneous databases

GenomeRNAii388381.
NextBioi102009.

Gene expression databases

BgeeiA8MV24.
GenevestigatoriA8MV24.

Family and domain databases

InterProiIPR028027. DUF4542.
[Graphical view]
PfamiPF15075. DUF4542. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
    Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L.
    , Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
    Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCQ098_HUMAN
AccessioniPrimary (citable) accession number: A8MV24
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: December 4, 2007
Last modified: January 7, 2015
This is version 49 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.