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A8MV24

- CQ098_HUMAN

UniProt

A8MV24 - CQ098_HUMAN

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Protein

Uncharacterized protein C17orf98

Gene

C17orf98

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein C17orf98
Gene namesi
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 17

Organism-specific databases

HGNCiHGNC:34492. C17orf98.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA162378591.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 154154Uncharacterized protein C17orf98PRO_0000340710Add
BLAST

Proteomic databases

PaxDbiA8MV24.
PRIDEiA8MV24.

Expressioni

Gene expression databases

BgeeiA8MV24.
GenevestigatoriA8MV24.

Organism-specific databases

HPAiHPA051696.

Structurei

3D structure databases

ProteinModelPortaliA8MV24.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiNOG26781.
GeneTreeiENSGT00390000004450.
HOGENOMiHOG000007685.
HOVERGENiHBG098397.
InParanoidiA8MV24.
OMAiDYFHIFG.
OrthoDBiEOG7G4QHH.
PhylomeDBiA8MV24.
TreeFamiTF338072.

Family and domain databases

InterProiIPR028027. DUF4542.
[Graphical view]
PfamiPF15075. DUF4542. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8MV24-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MAYLSECRLR LEKGFILDGV AVSTAARAYG RSRPKLWSAI PPYNAQQDYH
60 70 80 90 100
ARSYFQSHVV PPLLRKTDQD HGGTGRDGWI VDYIHIFGQG QRYLNRRNWA
110 120 130 140 150
GTGHSLQQVT GHDHYNADLK PIDGFNGRFG YRRNTPALRQ STSVFGEVTH

FPLF
Length:154
Mass (Da):17,565
Last modified:December 4, 2007 - v1
Checksum:i8F1BAD4B79026747
GO

Natural variant

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Natural varianti61 – 611P → L.
Corresponds to variant rs7210156 [ dbSNP | Ensembl ].
VAR_044022

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006449 Genomic DNA. No translation available.
CH471152 Genomic DNA. Translation: EAW60538.1.
CCDSiCCDS42310.1.
RefSeqiNP_001073934.1. NM_001080465.2.
UniGeneiHs.250182.

Genome annotation databases

EnsembliENST00000614158; ENSP00000479396; ENSG00000275489.
GeneIDi388381.
KEGGihsa:388381.
UCSCiuc002hqv.2. human.

Keywords - Coding sequence diversityi

Polymorphism

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC006449 Genomic DNA. No translation available.
CH471152 Genomic DNA. Translation: EAW60538.1 .
CCDSi CCDS42310.1.
RefSeqi NP_001073934.1. NM_001080465.2.
UniGenei Hs.250182.

3D structure databases

ProteinModelPortali A8MV24.
ModBasei Search...
MobiDBi Search...

Proteomic databases

PaxDbi A8MV24.
PRIDEi A8MV24.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000614158 ; ENSP00000479396 ; ENSG00000275489 .
GeneIDi 388381.
KEGGi hsa:388381.
UCSCi uc002hqv.2. human.

Organism-specific databases

CTDi 388381.
GeneCardsi GC17M036991.
HGNCi HGNC:34492. C17orf98.
HPAi HPA051696.
neXtProti NX_A8MV24.
PharmGKBi PA162378591.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG26781.
GeneTreei ENSGT00390000004450.
HOGENOMi HOG000007685.
HOVERGENi HBG098397.
InParanoidi A8MV24.
OMAi DYFHIFG.
OrthoDBi EOG7G4QHH.
PhylomeDBi A8MV24.
TreeFami TF338072.

Miscellaneous databases

GenomeRNAii 388381.
NextBioi 102009.

Gene expression databases

Bgeei A8MV24.
Genevestigatori A8MV24.

Family and domain databases

InterProi IPR028027. DUF4542.
[Graphical view ]
Pfami PF15075. DUF4542. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
    Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L.
    , Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
    Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiCQ098_HUMAN
AccessioniPrimary (citable) accession number: A8MV24
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 10, 2008
Last sequence update: December 4, 2007
Last modified: October 29, 2014
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. Human entries with polymorphisms or disease mutations
    List of human entries with polymorphisms or disease mutations
  3. Human polymorphisms and disease mutations
    Index of human polymorphisms and disease mutations

External Data

Dasty 3