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A8MSI8

- LYRM9_HUMAN

UniProt

A8MSI8 - LYRM9_HUMAN

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Protein
LYR motif-containing protein 9
Gene
LYRM9, C17orf108, HSD24
Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Names & Taxonomyi

Protein namesi
Recommended name:
LYR motif-containing protein 9
Gene namesi
Name:LYRM9
Synonyms:C17orf108
ORF Names:HSD24
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 17

Organism-specific databases

HGNCiHGNC:27314. LYRM9.

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA165431642.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7878LYR motif-containing protein 9
PRO_0000345398Add
BLAST

Proteomic databases

PaxDbiA8MSI8.
PRIDEiA8MSI8.

Expressioni

Gene expression databases

ArrayExpressiA8MSI8.
BgeeiA8MSI8.
GenevestigatoriA8MSI8.

Organism-specific databases

HPAiHPA023051.

Structurei

3D structure databases

ProteinModelPortaliA8MSI8.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiNOG40483.
HOGENOMiHOG000237835.
HOVERGENiHBG108633.
PhylomeDBiA8MSI8.
TreeFamiTF335914.

Family and domain databases

InterProiIPR008011. Complex1_LYR.
[Graphical view]
PfamiPF05347. Complex1_LYR. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

A8MSI8-1 [UniParc]FASTAAdd to Basket

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MAPLPGAELV RRPLQLYRYL LRCCQQLPTK GIQQHYKHAV RQSFRVHSDE   50
DNPERIQQII KRAIEDADWI MNKYKKQN 78
Length:78
Mass (Da):9,374
Last modified:July 22, 2008 - v2
Checksum:i3E572BC92CCB24C3
GO

Sequence cautioni

The sequence EAW51051.1 differs from that shown. Reason: Erroneous gene model prediction.

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR601114 mRNA. No translation available.
AC005697 Genomic DNA. No translation available.
CH471159 Genomic DNA. Translation: EAW51051.1. Sequence problems.
AY251535 mRNA. Translation: AAP20058.1. Sequence problems.
CCDSiCCDS45631.1.
RefSeqiNP_001070148.1. NM_001076680.1.
XP_005258000.1. XM_005257943.2.
XP_005258001.1. XM_005257944.2.
UniGeneiHs.687951.

Genome annotation databases

EnsembliENST00000379102; ENSP00000368396; ENSG00000232859.
ENST00000379103; ENSP00000368397; ENSG00000232859.
GeneIDi201229.
KEGGihsa:201229.
UCSCiuc002gzx.3. human.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR601114 mRNA. No translation available.
AC005697 Genomic DNA. No translation available.
CH471159 Genomic DNA. Translation: EAW51051.1 . Sequence problems.
AY251535 mRNA. Translation: AAP20058.1 . Sequence problems.
CCDSi CCDS45631.1.
RefSeqi NP_001070148.1. NM_001076680.1.
XP_005258000.1. XM_005257943.2.
XP_005258001.1. XM_005257944.2.
UniGenei Hs.687951.

3D structure databases

ProteinModelPortali A8MSI8.
ModBasei Search...

Proteomic databases

PaxDbi A8MSI8.
PRIDEi A8MSI8.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000379102 ; ENSP00000368396 ; ENSG00000232859 .
ENST00000379103 ; ENSP00000368397 ; ENSG00000232859 .
GeneIDi 201229.
KEGGi hsa:201229.
UCSCi uc002gzx.3. human.

Organism-specific databases

CTDi 201229.
GeneCardsi GC17M026206.
HGNCi HGNC:27314. LYRM9.
HPAi HPA023051.
neXtProti NX_A8MSI8.
PharmGKBi PA165431642.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG40483.
HOGENOMi HOG000237835.
HOVERGENi HBG108633.
PhylomeDBi A8MSI8.
TreeFami TF335914.

Miscellaneous databases

GenomeRNAii 201229.
NextBioi 90084.

Gene expression databases

ArrayExpressi A8MSI8.
Bgeei A8MSI8.
Genevestigatori A8MSI8.

Family and domain databases

InterProi IPR008011. Complex1_LYR.
[Graphical view ]
Pfami PF05347. Complex1_LYR. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Full-length cDNA libraries and normalization."
    Li W.B., Gruber C., Jessee J., Polayes D.
    Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Fetal brain.
  2. "DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage."
    Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L.
    , Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.
    Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
  4. "A new spermatogenesis-related gene."
    Wu N., Miao S.Y., Zhang X.D., Qiao Y., Liang G., Wang L.F.
    Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 17-78.
    Tissue: Testis.

Entry informationi

Entry nameiLYRM9_HUMAN
AccessioniPrimary (citable) accession number: A8MSI8
Secondary accession number(s): A6NJT7, Q6X7B8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: July 22, 2008
Last sequence update: July 22, 2008
Last modified: July 9, 2014
This is version 49 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 17
    Human chromosome 17: entries, gene names and cross-references to MIM
  2. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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