A8MSI8 (LYRM9_HUMAN) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
LYR motif-containing protein 9

Gene names

Name:	LYRM9
ORF Names:	C17orf108, HSD24

Organism

Homo sapiens (Human) [Reference proteome]

Taxonomic identifier

9606 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Primates › Haplorrhini › Simiiformes › Catarrhini › Hominoidea › Hominidae › Homininae › Homo

Protein attributes

Sequence length	78 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities	Belongs to the complex I LYR family. LYRM9 subfamily.
Sequence caution	The sequence AAP20058.1 differs from that shown. Reason: Erroneous translation. Wrong choice of CDS. The sequence EAW51051.1 differs from that shown. Reason: Erroneous gene model prediction.

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 78	78	LYR motif-containing protein 9		PRO_0000345398

Sequences

	Sequence		Length	Mass (Da)
	A8MSI8 [UniParc]. Last modified July 22, 2008. Version 2. Checksum: 3E572BC92CCB24C3	FASTA	78	9,374
	10 20 30 40 50 60 MAPLPGAELV RRPLQLYRYL LRCCQQLPTK GIQQHYKHAV RQSFRVHSDE DNPERIQQII 70 KRAIEDADWI MNKYKKQN

References

[1]	"Full-length cDNA libraries and normalization." Li W.B., Gruber C., Jessee J., Polayes D. Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Fetal brain.
[2]	"DNA sequence of human chromosome 17 and analysis of rearrangement in the human lineage." Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R., Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A., Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J., Chang J.L. , Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J., DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R., Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N., Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B., Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J., Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E., Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J., Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C., Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D., Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A., Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C. Nature 440:1045-1049(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[3]	Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S., Turner R. , Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W., Venter J.C. Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
[4]	"A new spermatogenesis-related gene." Wu N., Miao S.Y., Zhang X.D., Qiao Y., Liang G., Wang L.F. Submitted (MAR-2003) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 17-78. Tissue: Testis.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR601114 mRNA. No translation available. AC005697 Genomic DNA. No translation available. CH471159 Genomic DNA. Translation: EAW51051.1. Sequence problems. AY251535 mRNA. Translation: AAP20058.1. Sequence problems.
IPI	IPI00401940.
RefSeq	NP_001070148.1. NM_001076680.1.
UniGene	Hs.434386.
3D structure databases
ProteinModelPortal	A8MSI8.
ModBase	Search...
Proteomic databases
PaxDb	A8MSI8.
PRIDE	A8MSI8.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENST00000379102; ENSP00000368396; ENSG00000232859. ENST00000379103; ENSP00000368397; ENSG00000232859.
GeneID	201229.
KEGG	hsa:201229.
UCSC	uc002gzx.3. human.
Organism-specific databases
CTD	201229.
GeneCards	GC17M026205.
HGNC	HGNC:27314. LYRM9.
HPA	HPA023051.
neXtProt	NX_A8MSI8.
PharmGKB	PA165431642.
GenAtlas	Search...
Phylogenomic databases
eggNOG	NOG40483.
HOGENOM	HOG000237835.
HOVERGEN	HBG108633.
Gene expression databases
ArrayExpress	A8MSI8.
Bgee	A8MSI8.
Genevestigator	A8MSI8.
Family and domain databases
InterPro	IPR008011. Complex1_LYR. [Graphical view]
Pfam	PF05347. Complex1_LYR. 1 hit. [Graphical view]
ProtoNet	Search...
Other
GenomeRNAi	201229.
NextBio	90084.

Entry information

Entry name

LYRM9_HUMAN

Accession

Primary (citable) accession number: A8MSI8
Secondary accession number(s): A6NJT7, Q6X7B8

Entry history

Integrated into UniProtKB/Swiss-Prot:	July 22, 2008
Last sequence update:	July 22, 2008
Last modified:	April 3, 2013
This is version 40 of the entry and version 2 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Chordata Protein Annotation Program

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.