A8MS78 (Y1583_ARATH) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
Uncharacterized protein At1g05835

Gene names

Ordered Locus Names:	At1g05835
ORF Names:	T20M3.10

Organism

Arabidopsis thaliana (Mouse-ear cress)

Taxonomic identifier

3702 [NCBI]

Taxonomic lineage

Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › malvids › Brassicales › Brassicaceae › Camelineae › Arabidopsis

Protein attributes

Sequence length	127 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence caution

The sequence AAF29390.1 differs from that shown. Reason: Erroneous gene model prediction. The predicted gene has been split into 2 genes: At1g05830 and At1g05835. The sequence AAL87299.1 differs from that shown. Reason: Erroneous initiation.

Ontologies

Keywords
Domain	Signal
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 23	23	Potential
	Chain	24 – 127	104	Uncharacterized protein At1g05835		PRO_0000381975
Experimental info
	Sequence conflict	14	1	A → D in AAL87299. Ref.4

Sequences

	Sequence		Length	Mass (Da)
	A8MS78 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 36B24F9D64A585CA	FASTA	127	14,221
	10 20 30 40 50 60 MSKPLKFLLW SSLALLLLQI GSGAICEGKS SEPAVRQTQV KWREGKKFRV EVMNKCPMCP 70 80 90 100 110 120 IINLRLKCQG FPQSLVDPTF LRVLSSSAGN CVVNDGLPLS PMQTLSFNYS NTHQFALRPL SWSFQCE

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	"Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana." Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K. , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W. Nature 408:816-820(2000) [PubMed: 11130712] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Columbia.
[2]	The Arabidopsis Information Resource (TAIR) Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases Cited for: GENOME REANNOTATION. Strain: cv. Columbia.
[3]	"Empirical analysis of transcriptional activity in the Arabidopsis genome." Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G., Liu S.X., Lam B., Sakano H., Wu T., Yu G. , Miranda M., Quach H.L., Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C., Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J., Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A., Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C., Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X., Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M., Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K., Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R. Science 302:842-846(2003) [PubMed: 14593172] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Columbia.
[4]	"Full-length cDNA from Arabidopsis thaliana." Alexandrov N.N., Brover V.V., Troukhan M.E., Lu Y.-P., Flavell R.B., Feldmann K.A. Submitted (JUN-2005) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AC009999 Genomic DNA. Translation: AAF29390.1. Sequence problems. CP002684 Genomic DNA. Translation: AEE27902.1. AY080821 mRNA. Translation: AAL87299.1. Different initiation. DQ108722 mRNA. No translation available.
IPI	IPI00846305.
PIR	A86193.
RefSeq	NP_001077465.1. NM_001083996.2.
UniGene	At.27869. At.36998. At.67200.
3D structure databases
ModBase	Search...
Proteomic databases
PRIDE	A8MS78.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblPlants	AT1G05835.1; AT1G05835.1; AT1G05835.
GeneID	5007665.
GenomeReviews	Gene locus AT1G05835 in contig CT485782_GR.
KEGG	ath:AT1G05835.
Organism-specific databases
TAIR	At1g05835.
Phylogenomic databases
eggNOG	KOG1080.
GeneTree	EPGT00050000012734.
HOGENOM	HBG174248.
PhylomeDB	A8MS78.
ProtClustDB	CLSN2699034.
Gene expression databases
Genevestigator	A8MS78.
Family and domain databases
ProtoNet	Search...

Entry information

Entry name

Y1583_ARATH

Accession

Primary (citable) accession number: A8MS78
Secondary accession number(s): Q8RXL4, Q9MA43

Entry history

Integrated into UniProtKB/Swiss-Prot:	September 1, 2009
Last sequence update:	December 4, 2007
Last modified:	December 14, 2011
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Plant Protein Annotation Program