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Protein

Auxin-responsive protein

Gene

IAA11

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.UniRule annotationSAAS annotation

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR

GO - Biological processi

  • auxin-activated signaling pathway Source: UniProtKB-UniRule
  • response to auxin Source: TAIR
  • transcription, DNA-templated Source: UniProtKB-UniRule

Keywordsi

Molecular functionRepressorUniRule annotationSAAS annotation
Biological processAuxin signaling pathwayUniRule annotationSAAS annotation, Transcription, Transcription regulationUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Auxin-responsive proteinUniRule annotation
Gene namesi
Name:IAA11Imported
Ordered Locus Names:At4g28640Imported
ORF Names:T5F17.90Imported, T5F17_90Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 4

Organism-specific databases

AraportiAT4G28640
TAIRilocus:2139890 AT4G28640

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei277 – 300HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane, NucleusUniRule annotationSAAS annotation

Expressioni

Gene expression databases

ExpressionAtlasiA8MR39 baseline and differential

Interactioni

Subunit structurei

Homodimers and heterodimers.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliA8MR39
SMRiA8MR39
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini136 – 235PB1InterPro annotationAdd BLAST100

Sequence similaritiesi

Belongs to the Aux/IAA family.UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IVBZ Eukaryota
ENOG410YK71 LUCA
HOGENOMiHOG000238261
OMAiAHKCYES
OrthoDBiEOG09360MAG

Family and domain databases

InterProiView protein in InterPro
IPR033389 AUX/IAA_dom
IPR003311 AUX_IAA
IPR000270 PB1_dom
PANTHERiPTHR31734 PTHR31734, 1 hit
PfamiView protein in Pfam
PF02309 AUX_IAA, 1 hit
PROSITEiView protein in PROSITE
PS51745 PB1, 1 hit

Sequencei

Sequence statusi: Complete.

A8MR39-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEGGSASGSA SALSNDENLV VSCEDSSSPI GNELELGLTL SLGRKGYRDC
60 70 80 90 100
RVYADDSSSS SSSSSLSRAS VIAGIKRTAD SMAATSGQVV GWPPIRTYRM
110 120 130 140 150
NSMVNQAKAS ATEDPNLEIS QAVNKNRSDS TKMRNSMFVK VTMDGIPIGR
160 170 180 190 200
KIDLNAHKCY ESLSNTLEEM FLKPKLGSRT LETDGHMETP VKILPDGSSG
210 220 230 240 250
LVLTYEDKEG DWMLVGDVPW GMFIGSVRRL RIMKTSEATG KDDIMKQIII
260 270 280 290 300
YEEPFMFEAV IRQITDQRED KNIVRSFFFF SPLYSFFFGS AIFLLVSYMF

SL
Length:302
Mass (Da):33,334
Last modified:December 4, 2007 - v1
Checksum:i5F7DF86278B00219
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002687 Genomic DNA Translation: AEE85516.1
RefSeqiNP_001078460.1, NM_001084991.1
UniGeneiAt.25401

Genome annotation databases

EnsemblPlantsiAT4G28640.2; AT4G28640.2; AT4G28640
GeneIDi828982
GrameneiAT4G28640.2; AT4G28640.2; AT4G28640

Similar proteinsi

Entry informationi

Entry nameiA8MR39_ARATH
AccessioniPrimary (citable) accession number: A8MR39
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: April 25, 2018
This is version 78 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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