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Protein
Submitted name:

AT5G46840 protein

Gene

MZA15.26

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
AT5G46840 proteinImported
Submitted name:
RNA-binding (RRM/RBD/RNP motifs) family proteinImported
Gene namesi
Name:MZA15.26Imported
Ordered Locus Names:At5g46840Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 5

Organism-specific databases

AraportiAT5G46840

Expressioni

Gene expression databases

ExpressionAtlasiA8MQH7 baseline and differential

Structurei

3D structure databases

SMRiA8MQH7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini34 – 128RRMInterPro annotationAdd BLAST95
Domaini146 – 227RRMInterPro annotationAdd BLAST82

Phylogenomic databases

eggNOGiKOG0118 Eukaryota
COG0724 LUCA
HOGENOMiHOG000240569
KOiK14837

Family and domain databases

CDDicd12394 RRM1_RBM34, 1 hit
cd12395 RRM2_RBM34, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR034220 RBM34_RRM1
IPR034221 RBM34_RRM2
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

A8MQH7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKEKKVGEKR KKADEVADTM VSKEGFDDES KLLRTVFVGN LPLKVKKKVI
60 70 80 90 100
LKEFSKFGEV ESVRIRSVPI VDSKRTRKGA IMLKQINEKA SSVHAYVVFE
110 120 130 140 150
TEQSAAASLA HNMSLIDGNH VRVDRACPPR KKQKGHDDTH LYDPKRTVFM
160 170 180 190 200
GNLPFDVKDE EVYQLFTGKS NLENSIEAVR VIRDPHLNIG KGIAYVLFKT
210 220 230 240 250
REAANLVLKK GYLKLREREL RISRVKPDTP SKRKSNPSEA YSPAQKRLQK
260 270 280 290 300
DKVVTPTPTG KANLSYQGVR ASKSGDDKKT PYQKSSAQTK MRPRGSSSND
310 320 330 340 350
NKKSGNNSAS KERSQKRPAV AARKAKANAK GSKESGGKRF AGTKRKQENR
360
TPESFSKKKK TKRF
Length:364
Mass (Da):40,873
Last modified:December 4, 2007 - v1
Checksum:iAC1C2E692E6296CC
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002688 Genomic DNA Translation: AED95433.1
AK317464 mRNA Translation: BAH20130.1
RefSeqiNP_001078722.1, NM_001085253.1
UniGeneiAt.29928

Genome annotation databases

EnsemblPlantsiAT5G46840.1; AT5G46840.1; AT5G46840
AT5G46840.2; AT5G46840.2; AT5G46840
GeneIDi834728
GrameneiAT5G46840.1; AT5G46840.1; AT5G46840
AT5G46840.2; AT5G46840.2; AT5G46840
KEGGiath:AT5G46840

Similar proteinsi

Entry informationi

Entry nameiA8MQH7_ARATH
AccessioniPrimary (citable) accession number: A8MQH7
Entry historyiIntegrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 23, 2018
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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