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A8MK60 (A8MK60_ALKOO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Hydrolase, TatD family EMBL ABW20192.1
Gene names
Ordered Locus Names:Clos_2661
OrganismAlkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) [Complete proteome] [HAMAP] EMBL ABW20192.1
Taxonomic identifier350688 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Alkaliphilus

Protein attributes

Sequence length255 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionHydrolase EMBL ABW20192.1
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functionendodeoxyribonuclease activity, producing 5'-phosphomonoesters

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8MK60 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: E90060999D5230D3

FASTA25529,155
        10         20         30         40         50         60 
MIFDSHAHLD DERFDGERDQ IIARAKESGI ELILNPGADL NTSLRAVNLA EKYEMIYAAV 

        70         80         90        100        110        120 
GVHPHDVKDM DEDTIEVLRA LSNKEKVVAI GEIGLDFYYD HSPRELQRKW FRRQIELAKE 

       130        140        150        160        170        180 
VNLPMIIHDR DAHEETFKIL KEYDAGTLGC VMHCYASSVE MAREYIKMGV YISLAGPVTF 

       190        200        210        220        230        240 
NNARKTYEVA KEIPLEWLLV ETDSPYLTPV PYRGKRNEPA YVKLVAEKIA EAKGITLEEV 

       250 
ARQTTLNAKK LFKID

« Hide

References

[1]"Complete genome of Alkaliphilus oremlandii OhILAs."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Stolz J.F., Dawson A., Fisher E., Crable B., Perera E., Lisak J., Ranganathan M., Basu P., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OhILAs.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000853 Genomic DNA. Translation: ABW20192.1.
RefSeqYP_001514188.1. NC_009922.1.

3D structure databases

ProteinModelPortalA8MK60.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8MK60.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5678072.
GenomeReviewsGene locus Clos_2661 in contig CP000853_GR.
KEGGaoe:Clos_2661.
PATRIC20870806. VBIAlkOre124042_2780.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG629833.
OMALPLVIHT.
ProtClustDBCLSK965123.

Family and domain databases

InterProIPR012278. DNase_TatD.
IPR018228. DNase_TatD-rel_CS.
IPR015991. DNase_TatD_bac-type.
IPR001130. TatD_superfamily.
[Graphical view]
KOK03424.
PANTHERPTHR10060. TatD_DNase. 1 hit.
PfamPF01026. TatD_DNase. 1 hit.
[Graphical view]
PIRSFPIRSF005902. DNase_TatD. 1 hit.
TIGRFAMsTIGR00010. TIGR00010. 1 hit.
PROSITEPS01137. TATD_1. 1 hit.
PS01090. TATD_2. 1 hit.
PS01091. TATD_3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8MK60_ALKOO
AccessionPrimary (citable) accession number: A8MK60
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: January 25, 2012
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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