A8MK43 (PTH_ALKOO) Reviewed, UniProtKB/Swiss-Prot
Last modified
January 25, 2012.
Version 26.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Peptidyl-tRNA hydrolase Short name=PTH EC=3.1.1.29 | ||||
| Gene names |
| ||||
| Organism | Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 350688 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Alkaliphilus |
Protein attributes
| Sequence length | 185 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis By similarity. HAMAP MF_00083 |
| Catalytic activity | N-substituted aminoacyl-tRNA + H2O = N-substituted amino acid + tRNA. HAMAP MF_00083 |
| Subunit structure | Monomer By similarity. HAMAP MF_00083 |
| Subcellular location | Cytoplasm By similarity HAMAP MF_00083. |
| Sequence similarities | Belongs to the PTH family. |
Ontologies
| Keywords | |
|---|---|
| Cellular component | Cytoplasm |
| Molecular function | Hydrolase |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Cellular component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | aminoacyl-tRNA hydrolase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 185 | 185 | Peptidyl-tRNA hydrolase HAMAP MF_00083 | PRO_1000057545 | |||
Sequences
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References
| [1] | "Complete genome of Alkaliphilus oremlandii OhILAs." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. Richardson P.Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OhILAs. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP000853 Genomic DNA. Translation: ABW20175.1. |
| RefSeq | YP_001514171.1. NC_009922.1. |
3D structure databases | |
| ProteinModelPortal | A8MK43. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | A8MK43. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 5677436. |
| GenomeReviews | Gene locus Clos_2644 in contig CP000853_GR. |
| KEGG | aoe:Clos_2644. |
| PATRIC | 20870770. VBIAlkOre124042_2762. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| HOGENOM | HBG610927. |
| OMA | IKFKTGG. |
| ProtClustDB | PRK05426. |
Enzyme and pathway databases | |
| BioCyc | AORE350688:CLOS_2644-MONOMER. |
Family and domain databases | |
| HAMAP | MF_00083. Pept_tRNA_hydro_bact. [Tree] |
| InterPro | IPR001328. Pept_tRNA_hydro. IPR018171. Pept_tRNA_hydro_CS. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1470. Pept_tRNA_hydro. 1 hit. |
| KO | K01056. |
| PANTHER | PTHR17224. Pept_tRNA_hydro. 1 hit. |
| Pfam | PF01195. Pept_tRNA_hydro. 1 hit. [Graphical view] |
| SUPFAM | SSF53178. Pept_tRNA_hydro. 1 hit. |
| TIGRFAMs | TIGR00447. Pth. 1 hit. |
| PROSITE | PS01195. PEPT_TRNA_HYDROL_1. 1 hit. PS01196. PEPT_TRNA_HYDROL_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | PTH_ALKOO | ||||||||
| Accession | Primary (citable) accession number: A8MK43 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Prokaryotic Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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