A8MJI9 (A8MJI9_ALKOO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glycoside hydrolase family 25 EMBL ABW19971.1

Gene names

Ordered Locus Names:

Clos_2439

Organism

Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) [Complete proteome] [HAMAP] EMBL ABW19971.1

Taxonomic identifier

350688 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Alkaliphilus

Protein attributes

Sequence length	254 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABW19971.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cell wall macromolecule catabolic process Inferred from electronic annotation. Source: InterPro peptidoglycan catabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	cation binding Inferred from electronic annotation. Source: InterPro lysozyme activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8MJI9 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 288EA8A1FD0A9F69	FASTA	254	29,631
	10 20 30 40 50 60 MIIDISSHQV PANMNYDELA KQVKLVIIRT QYGSRLIDKH YKTHHREFKK RGIPTAAYAW 70 80 90 100 110 120 VRGTSIEDMR VEATDFYNRT KEFNPTIWFI DVEEQSMDDM SSGVSAYVKT LRDLGAKKVG 130 140 150 160 170 180 IYIGHHLYKT FNLNLEEVDA VWIPHYGRND GTLNSTPIYP CDIHQYTDKG KLNGYSGYLD 190 200 210 220 230 240 LNRLMGTKPL SFFTGNEEKD FDTIQINLHG KDMEVQGIWK DNINYIPVRF LEKLGYKVDW 250 KDNKVMIRYK GEEI

References

[1]

"Complete genome of Alkaliphilus oremlandii OhILAs." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Stolz J.F., Dawson A., Fisher E., Crable B., Perera E., Lisak J., Ranganathan M., Basu P., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OhILAs.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000853 Genomic DNA. Translation: ABW19971.1.
RefSeq	YP_001513967.1. NC_009922.1.
3D structure databases
ProteinModelPortal	A8MJI9.
ModBase	Search...
Protein-protein interaction databases
STRING	A8MJI9.
Protein family/group databases
CAZy	GH25. Glycoside Hydrolase Family 25.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5677216.
GenomeReviews	Gene locus Clos_2439 in contig CP000853_GR.
KEGG	aoe:Clos_2439.
PATRIC	20870354. VBIAlkOre124042_2554.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG340878.
OMA	VAGIGKC.
Family and domain databases
InterPro	IPR002053. Glyco_hydro_25. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. [Graphical view]
Gene3D	G3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KO	K01447.
Pfam	PF01183. Glyco_hydro_25. 1 hit. [Graphical view]
SUPFAM	SSF51445. Glyco_hydro_cat. 1 hit.
ProtoNet	Search...

Entry information

Entry name

A8MJI9_ALKOO

Accession

Primary (citable) accession number: A8MJI9

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)