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A8MIM9 (A8MIM9_ALKOO) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Clos_2125
OrganismAlkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) [Complete proteome] [HAMAP] EMBL ABW19661.1
Taxonomic identifier350688 [NCBI]
Taxonomic lineageBacteriaFirmicutesClostridiaClostridialesClostridiaceaeAlkaliphilus

Protein attributes

Sequence length287 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
A8MIM9 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 02085F9CF806DF74

FASTA28731,432
        10         20         30         40         50         60 
MATAQDYSNK ITPTWCPGCG HFSILRAIQT AASKLDIPMD QFASVTGIGC SGRLSGYLNG 

        70         80         90        100        110        120 
YGFHSIHGRS LPIAQGIKMA NKDLVVLAAG GDGDGFAIGT SHTLHAIRRN LNMTYIVLNN 

       130        140        150        160        170        180 
QIYGLTKGHT SPLSDTGFET KSTPFGSMDN PLKPGITALA AGATYLAQGF SGFQDQLIDI 

       190        200        210        220        230        240 
IVKGIEHNGF SIINVFSPCV TFNKQNTYQW YRDHIVNLDE DSTYDPMDYQ RAMNKLIETD 

       250        260        270        280 
GLCSGIIYQK NEPSFLDRIQ GAEAKPLIDL DTTISKEEFE NLLNRFK 

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References

[1]"Complete genome of Alkaliphilus oremlandii OhILAs."
Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. expand/collapse author list , Hauser L., Kyrpides N., Mikhailova N., Stolz J.F., Dawson A., Fisher E., Crable B., Perera E., Lisak J., Ranganathan M., Basu P., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: OhILAs.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000853 Genomic DNA. Translation: ABW19661.1.
RefSeqYP_001513657.1. NC_009922.1.

3D structure databases

ProteinModelPortalA8MIM9.
ModBaseSearch...

Protein-protein interaction databases

STRING350688.Clos_2125.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABW19661; ABW19661; Clos_2125.
GeneID5676636.
KEGGaoe:Clos_2125.
PATRIC20869612. VBIAlkOre124042_2232.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1013.
HOGENOMHOG000007086.
KOK00175.
OMAIGQAGKM.
ProtClustDBPRK11867.

Enzyme and pathway databases

BioCycAORE350688:GHBG-2238-MONOMER.

Family and domain databases

InterProIPR011896. PorB_KorB.
IPR011766. TPP_enzyme-bd_C.
[Graphical view]
PfamPF02775. TPP_enzyme_C. 1 hit.
[Graphical view]
TIGRFAMsTIGR02177. PorB_KorB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8MIM9_ALKOO
AccessionPrimary (citable) accession number: A8MIM9
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)