A8MFT0 (A8MFT0_ALKOO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Integrase catalytic region EMBL ABW17719.1

Gene names

Ordered Locus Names:

Clos_0152, Clos_0736

Organism

Alkaliphilus oremlandii (strain OhILAs) (Clostridium oremlandii (strain OhILAs)) [Complete proteome] [HAMAP] EMBL ABW17719.1

Taxonomic identifier

350688 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Clostridiaceae › Alkaliphilus › Alkaliphilus oremlandii

Protein attributes

Sequence length	277 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA integration Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8MFT0 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 23AD2A7B1D1D2634	FASTA	277	32,471
	10 20 30 40 50 60 MIRNNAHKYS VSAMCKVLEI SRSSYYYESK PKQYESKLTS KIKKIFQESR SNYGTRKIKA 70 80 90 100 110 120 VLRDNGYQVS RRRIGRIMKQ EGLVSKYTVA QFRPYADKCN ESQIENLVKR EFDDRSQYNV 130 140 150 160 170 180 VVSDLTYVRV GNQWNYICVL VDLFNREIIG YSAGKNKDAN LVSKAFARVN TNLKNIQVFH 190 200 210 220 230 240 TDRGNEFKNK LLDETLKIFD IKRSLSKKGC PYDNAVAEAT FKIIKTEFVK YKVFETLEEL 250 260 270 QYELADYVNW FNNHRLHSSL GYLTPATFRM NTLKKVV

References

[1]

"Complete genome of Alkaliphilus oremlandii OhILAs." Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C., Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J., Larimer F., Land M. , Hauser L., Kyrpides N., Mikhailova N., Stolz J.F., Dawson A., Fisher E., Crable B., Perera E., Lisak J., Ranganathan M., Basu P., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: OhILAs.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000853 Genomic DNA. Translation: ABW17719.1. CP000853 Genomic DNA. Translation: ABW18292.1.
RefSeq	YP_001511715.1. NC_009922.1. YP_001512288.1. NC_009922.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABW17719; ABW17719; Clos_0152. ABW18292; ABW18292; Clos_0736.
GeneID	5676067. 5678675.
KEGG	aoe:Clos_0152. aoe:Clos_0736.
PATRIC	20865384. VBIAlkOre124042_0163.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2801.
HOGENOM	HOG000023132.
OMA	YVNWFNN.
ProtClustDB	CLSK872675.
Enzyme and pathway databases
BioCyc	AORE350688:GHBG-267-MONOMER. AORE350688:GHBG-850-MONOMER.
Family and domain databases
InterPro	IPR025948. HTH-like_dom. IPR001584. Integrase_cat-core. IPR012337. RNaseH-like_dom. [Graphical view]
Pfam	PF13276. HTH_21. 1 hit. PF00665. rve. 1 hit. [Graphical view]
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
PROSITE	PS50994. INTEGRASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8MFT0_ALKOO

Accession

Primary (citable) accession number: A8MFT0

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)