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A8MA89 (A8MA89_CALMQ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Alpha-L-rhamnosidase EMBL ABW01021.1
Gene names
Ordered Locus Names:Cmaq_0172
OrganismCaldivirga maquilingensis (strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) [Complete proteome] [HAMAP]
Taxonomic identifier397948 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Caldivirga

Protein attributes

Sequence length894 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8MA89 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 61EE88AC1C833E58

FASTA894101,115
        10         20         30         40         50         60 
MVHGLRIIDA RVEFTVNPLG IDESKPRFSW ILEHEERGQY QSAYRVIVSS SLENAVKGIG 

        70         80         90        100        110        120 
DVWDSGKVNS RDQVIKYNGP PLSSFTKYYW RVKAWDSNGV EGDWSDVQWF ETAVLKPEEW 

       130        140        150        160        170        180 
SGKWIGGGQL LRRSFRVEGS VIEAKAYVTG LGYYELRING ERVGDRVLDP PWSEYDKTVY 

       190        200        210        220        230        240 
YSVYDVTNLV KSGENVIGLI LGRGRYGPVS PNRAQIPGLK YYDEPKASAM IRIRLSDGSV 

       250        260        270        280        290        300 
ITINTDESWK CLVKGPILYD DIYNGYRYDA RLEPYGWDKA GFDDSNWVQC SVVKPPGGRL 

       310        320        330        340        350        360 
RSTAAVPGTK VKGTLKPREY YNPRPGVYVF DFGQNITGWV RLRVRGSSGV EVKVRHSEVI 

       370        380        390        400        410        420 
NSDGSLNVEN IRGAEATDTY ILSGRDVEVL EPRFTYHGFR YAEVTGYPGV PSIDDVEAVI 

       430        440        450        460        470        480 
VQTDFESTGS IATSSKIIND IHRITWWSLR ANLLNGIQTD CPQRDERMGW LGDAWLSSDS 

       490        500        510        520        530        540 
AVFNFNMVKY YEKFIRDIID SQRDDGSIPD TVPPYWNTYP ADPAWGTALI YIPWLLYVHY 

       550        560        570        580        590        600 
GDVEILEEAY EAMKKWWSFL NSRVKDNVLY FSKYGEWVPP GRVFSAEYCP PEILSTWILY 

       610        620        630        640        650        660 
RDTLTLAQIA KVLGRGEDAS FFTKRAEEIR DAFNRVFLTE RGYYSKYTAP DGSVRMLGGS 

       670        680        690        700        710        720 
QTCNALPLYL DMVPGNRVND IVKALAHNIE ADWDRHLVVG IFGAKYVPEV LVKYGYVDLA 

       730        740        750        760        770        780 
YRAVTQESYP GWGYMIKEGA TTLWERWEKL TGAGMNSHNH HMFGSIDAWF YRDLAGLMTL 

       790        800        810        820        830        840 
EPGFSRIMIK PNIPSELRYC SASLYTVRGL TSVEWSRVND ELVVTVTVPV NSTAEVHLPK 

       850        860        870        880        890 
LGESTVVREG DKVLWSGGKV VEVSPGVLSV KDAGDRIVVE VGSGRFIFTI KTIN

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References

[1]"Complete sequence of Caldivirga maquilingensis IC-167."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ivanova N., Biddle J.F., Zhang Z., Fitz-Gibbon S.T., Lowe T.M., Saltikov C., House C.H., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000852 Genomic DNA. Translation: ABW01021.1.
RefSeqYP_001540011.1. NC_009954.1.

3D structure databases

ProteinModelPortalA8MA89.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8MA89.

Protein family/group databases

CAZyGH78. Glycoside Hydrolase Family 78.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5709030.
GenomeReviewsGene locus Cmaq_0172 in contig CP000852_GR.
KEGGcma:Cmaq_0172.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG696677.
OMAACNALPL.
ProtClustDBCLSK971411.

Family and domain databases

InterProIPR008928. 6-hairpin_glycosidase-like.
IPR016007. Alpha_rhamnosid.
IPR008902. Bac_rhamnosid.
IPR013737. Bac_rhamnosid_N.
[Graphical view]
KOK05989.
PfamPF05592. Bac_rhamnosid. 1 hit.
PF08531. Bac_rhamnosid_N. 1 hit.
[Graphical view]
PIRSFPIRSF010631. A-rhamnsds. 1 hit.
SUPFAMSSF48208. Glyco_trans_6hp. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8MA89_CALMQ
AccessionPrimary (citable) accession number: A8MA89
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: January 25, 2012
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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