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A8M9E1 (A8M9E1_CALMQ) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 24. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Glycoside hydrolase family 1 EMBL ABW02360.1
Gene names
Ordered Locus Names:Cmaq_1537
OrganismCaldivirga maquilingensis (strain ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) [Complete proteome] [HAMAP]
Taxonomic identifier397948 [NCBI]
Taxonomic lineageArchaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Caldivirga

Protein attributes

Sequence length399 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 1 family. RuleBase RU003690

Ontologies

Keywords
   DomainSignal EMBL ABW02360.1
   Molecular functionHydrolase EMBL ABW02360.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular functioncation binding

Inferred from electronic annotation. Source: InterPro

hydrolase activity, hydrolyzing O-glycosyl compounds

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2121 Potential EMBL ABW02360.1
Chain22 – 399378 Potential EMBL ABW02360.1
PRO_5000281642

Sequences

Sequence LengthMass (Da)Tools
A8M9E1 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 14F8ECE5B41E79EC

FASTA39945,417
        10         20         30         40         50         60 
MSKLKVPSGF MIGAALSAYQ VEGNNVNADW WHYEGERLPR SGSACDFWNR YRGDIELAAS 

        70         80         90        100        110        120 
LGLKALRISI AWDRVMPSEG KVDDESMDRY VDMIKEIRGH GMEPVVTLHH FVNPMWFATR 

       130        140        150        160        170        180 
GGWVKEDNVK YFLDFVKYVA DSVGDRVRFW LTINEINLYP ILAYLLGVFP PFIMNMEYMW 

       190        200        210        220        230        240 
KALMNLLKAS DKAYELIKKP SNQVGLIIHI MPARPASRIS ITDWGLAMGM NYVLNKMIVN 

       250        260        270        280        290        300 
TLAKGRLPNW LGGGEVGKLD YVGLNYYTVA KVKFNPLTMG ELVTSRQSQR GWVINPGGLK 

       310        320        330        340        350        360 
WAIRLVRRIG KPIMITENGI ATDNDEDRIS FIEKHLAIAI KEKVLGYLYW SLLDNYEWEM 

       370        380        390 
GYNAKFGLIE CDPVTLTRRP RGSAYFLGKL ASGNPITLH

« Hide

References

[1]"Complete sequence of Caldivirga maquilingensis IC-167."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Saunders E., Brettin T., Bruce D., Detter J.C., Han C., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Ivanova N., Biddle J.F., Zhang Z., Fitz-Gibbon S.T., Lowe T.M., Saltikov C., House C.H., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000852 Genomic DNA. Translation: ABW02360.1.
RefSeqYP_001541350.1. NC_009954.1.

3D structure databases

ProteinModelPortalA8M9E1.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8M9E1.

Protein family/group databases

CAZyGH1. Glycoside Hydrolase Family 1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5709052.
GenomeReviewsGene locus Cmaq_1537 in contig CP000852_GR.
KEGGcma:Cmaq_1537.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG316462.
OMAACNHWEL.

Family and domain databases

InterProIPR001360. Glyco_hydro_1.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
KOK05350.
PANTHERPTHR10353. Glyco_hydro_1. 1 hit.
PfamPF00232. Glyco_hydro_1. 2 hits.
[Graphical view]
PRINTSPR00131. GLHYDRLASE1.
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
ProtoNetSearch...

Entry information

Entry nameA8M9E1_CALMQ
AccessionPrimary (citable) accession number: A8M9E1
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: January 25, 2012
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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