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A8M8D2 (A8M8D2_SALAI) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Ricin B lectin EMBL ABV98955.1
Gene names
Ordered Locus Names:Sare_3147
OrganismSalinispora arenicola (strain CNS-205) [Complete proteome] [HAMAP] EMBL ABV98955.1
Taxonomic identifier391037 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length522 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   LigandLectin EMBL ABV98955.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processproteolysis

Inferred from electronic annotation. Source: InterPro

   Cellular componentextracellular region

Inferred from electronic annotation. Source: InterPro

   Molecular functionserine-type endopeptidase activity

Inferred from electronic annotation. Source: InterPro

sugar binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8M8D2 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 5AC9D06A4552463E

FASTA52253,656
        10         20         30         40         50         60 
MSRTLNALVG FVLGICLVTA PAPAVGAATA GVSGASDTLA TPVVATPVAA EPTALPAGQL 

        70         80         90        100        110        120 
EALRRDLDLT ADQLAARLTV DATAPSIERR MRAELADAYA GTWITADGRT TVVGLTDPAL 

       130        140        150        160        170        180 
ADQIRAVGAE PRTVTRSLAE LRWLTTRLDR RAARAGDAVH AWHVAPASNT VAIQASNPAA 

       190        200        210        220        230        240 
ATSFARAAGL PNDAVSVVVS DDAYRPVYDI RGGDQYVIDN RLICSVGFAV AGGFVTAGHC 

       250        260        270        280        290        300 
GDVGEPTSGS GVAQGTVRGS SFPGDDYGWV QTNATWTPRP WVSTHDGNVV TVTGSQEAAV 

       310        320        330        340        350        360 
GASVCRSGRT TGWRCGTITA TNVTVNYSGQ LVHGLVRSTA CAQPGDSGGP FVAGSQAQGV 

       370        380        390        400        410        420 
TSGAGGDCAS GGTTVYQPVN EILSRYGLSL TTSGGGSTNR IIGLANKCVD VPGANGADGQ 

       430        440        450        460        470        480 
YLHLWHCNGT NAQDWTFPGD GTIRAFGLCM DVAWGSRENG AVVQLAHCSG NPAQQWVLTG 

       490        500        510        520 
ANDLVNPQAN KCLDVKDWNS ADGARLQTYE CHGGANQKWR LG

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References

[1]"Complete sequence of Salinispora arenicola CNS-205."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Jensen P.R., Moore B.S., Penn K. expand/collapse author list , Jenkins C., Udwary D., Xiang L., Gontang E., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CNS-205.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000850 Genomic DNA. Translation: ABV98955.1.
RefSeqYP_001537946.1. NC_009953.1.

3D structure databases

ProteinModelPortalA8M8D2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8M8D2.

Protein family/group databases

CAZyCBM13. Carbohydrate-Binding Module Family 13.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5706205.
GenomeReviewsGene locus Sare_3147 in contig CP000850_GR.
KEGGsaq:Sare_3147.
PATRIC23434831. VBISalAre38676_3177.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG696007.
OMALANKCVD.
ProtClustDBCLSK2530190.

Enzyme and pathway databases

BioCycSARE391037:SARE_3147-MONOMER.

Family and domain databases

InterProIPR009003. Pept_cys/ser_Trypsin-like.
IPR004236. Pept_S1_alpha_lytic.
IPR001316. Pept_S1A_streptogrisin.
IPR001254. Peptidase_S1_S6.
IPR008997. Ricin_B-rel_lectin.
IPR000772. Ricin_B_lectin.
[Graphical view]
PfamPF02983. Pro_Al_protease. 1 hit.
PF00652. Ricin_B_lectin. 1 hit.
PF00089. Trypsin. 1 hit.
[Graphical view]
PRINTSPR00861. ALYTICPTASE.
SMARTSM00458. RICIN. 1 hit.
[Graphical view]
SUPFAMSSF50494. Pept_Ser_Cys. 1 hit.
SSF50370. RicinB_like. 1 hit.
PROSITEPS50231. RICIN_B_LECTIN. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8M8D2_SALAI
AccessionPrimary (citable) accession number: A8M8D2
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: December 14, 2011
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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