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A8M6B2 (EFTS_SALAI) Reviewed, UniProtKB/Swiss-Prot

Last modified January 25, 2012. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Ts
Short name=EF-Ts
Gene names
Name:tsf
Ordered Locus Names:Sare_1231
OrganismSalinispora arenicola (strain CNS-205) [Complete proteome] [HAMAP]
Taxonomic identifier391037 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length275 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome By similarity. HAMAP MF_00050

Subcellular location

Cytoplasm By similarity HAMAP MF_00050.

Sequence similarities

Belongs to the EF-Ts family.

Ontologies

Keywords
   Biological processProtein biosynthesis
   Cellular componentCytoplasm
   Molecular functionElongation factor
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functiontranslation elongation factor activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 275275Elongation factor Ts HAMAP MF_00050
PRO_1000074877

Regions

Region76 – 794Involved in Mg(2+) ion dislocation from EF-Tu By similarity

Sequences

Sequence LengthMass (Da)Tools
A8M6B2 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: 87FAEA375992B8F1

FASTA27529,708
        10         20         30         40         50         60 
MSNFTAADVK KLRDLTGAGM MDSKKALTEA EGDFDKAIEI LRVKGAKDVG KRAGRTAANG 

        70         80         90        100        110        120 
LVAHSGKALL ELNCETDFVA KTDSFVALAQ QLVEHGERSG VNSAEELLAS KIDGKGVAEL 

       130        140        150        160        170        180 
VQEQSAKIGE KLVLNRFAKL DGTVAVYLHR KAQDLPPAVG VLVQYTGKTD EAGDADARGV 

       190        200        210        220        230        240 
AMQIAAMRPQ YLSRDDVPAE VVESERRIAE QTAREENKPE AALPKIVEGR VNSFFKDFVL 

       250        260        270 
LEQASVTDNK KPVRQVLAEA GVEITRFVRF EVGQA

« Hide

References

[1]"Complete sequence of Salinispora arenicola CNS-205."
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Jensen P.R., Moore B.S., Penn K. expand/collapse author list , Jenkins C., Udwary D., Xiang L., Gontang E., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CNS-205.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP000850 Genomic DNA. Translation: ABV97137.1.
RefSeqYP_001536128.1. NC_009953.1.

3D structure databases

ProteinModelPortalA8M6B2.
ModBaseSearch...

Protein-protein interaction databases

STRINGA8M6B2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID5705926.
GenomeReviewsGene locus Sare_1231 in contig CP000850_GR.
KEGGsaq:Sare_1231.
PATRIC23430942. VBISalAre38676_1247.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHBG713289.
OMAYLHGTRI.
ProtClustDBPRK09377.

Enzyme and pathway databases

BioCycSARE391037:SARE_1231-MONOMER.

Family and domain databases

HAMAPMF_00050. EF_Ts.
[Tree]
InterProIPR001816. Transl_elong_EFTs/EF1B.
IPR014039. Transl_elong_EFTs/EF1B_dimer.
IPR018101. Transl_elong_Ts_CS.
IPR009060. UBA-like.
IPR000449. UBA/transl_elong_EF1B_N.
[Graphical view]
Gene3DG3DSA:3.30.479.20. Transl_elong_EFTs/EF1B_dimer. 3 hits.
KOK02357.
PANTHERPTHR11741. Transl_elong_EFTs/EF1B. 1 hit.
PfamPF00889. EF_TS. 1 hit.
PF00627. UBA. 1 hit.
[Graphical view]
SUPFAMSSF54713. EF_TS. 1 hit.
SSF46934. UBA_like. 1 hit.
TIGRFAMsTIGR00116. Tsf. 1 hit.
PROSITEPS01126. EF_TS_1. 1 hit.
PS01127. EF_TS_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameEFTS_SALAI
AccessionPrimary (citable) accession number: A8M6B2
Entry history
Integrated into UniProtKB/Swiss-Prot: May 20, 2008
Last sequence update: December 4, 2007
Last modified: January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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