A8M660 (A8M660_SALAI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Ribonuclease III EMBL ABV97085.1
EC=3.1.26.3 EMBL ABV97085.1

Gene names

Ordered Locus Names:

Sare_1177

Organism

Salinispora arenicola (strain CNS-205) [Complete proteome] [HAMAP] EMBL ABV97085.1

Taxonomic identifier

391037 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora

Protein attributes

Sequence length	252 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

Ontologies

Keywords
Molecular function	Hydrolase EMBL ABV97085.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	RNA processing Inferred from electronic annotation. Source: InterPro rRNA catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell
Molecular function	double-stranded RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease III activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8M660 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 7B915CBBE77338F8	FASTA	252	26,677
	10 20 30 40 50 60 MTIDKRRRPA VGHLEAAFGV ALDPELLERA LTHRSYAYEN GGLPTNERLE FLGDSVLGVV 70 80 90 100 110 120 ITTALFHNHP DLPEGQLAKL RASVVNMRAL AEVARALGPT GLGPYLLLGK GEETTGGRDK 130 140 150 160 170 180 ASILADTLEA LLGAIYLQCG LDTAATVIHR LFDPLMADSA GRGAALDWKT SLQELTAAQG 190 200 210 220 230 240 LGVPEYRIEG TGPDHLKTFT AWVVVAGQRY GGAEGRSKKE AEQRAAEAAW RTLTEQAGQE 250 PAEAGSRAAG GA

References

[1]

"Complete sequence of Salinispora arenicola CNS-205." Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Jensen P.R., Moore B.S., Penn K. , Jenkins C., Udwary D., Xiang L., Gontang E., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CNS-205.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000850 Genomic DNA. Translation: ABV97085.1.
RefSeq	YP_001536076.1. NC_009953.1.
3D structure databases
ProteinModelPortal	A8M660.
SMR	A8M660. Positions 17-156.
ModBase	Search...
Protein-protein interaction databases
STRING	A8M660.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5703528.
GenomeReviews	Gene locus Sare_1177 in contig CP000850_GR.
KEGG	saq:Sare_1177.
PATRIC	23430837. VBISalAre38676_1195.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG744556.
OMA	ALTHKSF.
ProtClustDB	CLSK967923.
Enzyme and pathway databases
BioCyc	SARE391037:SARE_1177-MONOMER.
Family and domain databases
HAMAP	MF_00104. RNase_III. [Tree]
InterPro	IPR001159. Ds-RNA-bd. IPR014720. dsRNA-bd-like. IPR000999. RNase_III. IPR011907. RNase_III_bac. [Graphical view]
Gene3D	G3DSA:3.30.160.20. dsRNA-bd-like. 1 hit. G3DSA:1.10.1520.10. RNase_III. 1 hit.
KO	K03685.
PANTHER	PTHR11207. PTHR11207. 1 hit.
Pfam	PF00035. dsrm. 1 hit. PF00636. Ribonuclease_3. 1 hit. [Graphical view]
SMART	SM00358. DSRM. 1 hit. SM00535. RIBOc. 1 hit. [Graphical view]
SUPFAM	SSF69065. RNase_III. 1 hit.
TIGRFAMs	TIGR02191. RNaseIII. 1 hit.
PROSITE	PS50137. DS_RBD. 1 hit. PS00517. RNASE_3_1. 1 hit. PS50142. RNASE_3_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8M660_SALAI

Accession

Primary (citable) accession number: A8M660

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	January 25, 2012
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)