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A8M566 (A8M566_SALAI) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 37. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sare_4352 EMBL ABW00134.1
OrganismSalinispora arenicola (strain CNS-205) [Complete proteome] [HAMAP] EMBL ABW00134.1
Taxonomic identifier391037 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora

Protein attributes

Sequence length313 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ABW00134.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8M566 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: C920E2FC0FB62449

FASTA31333,657
        10         20         30         40         50         60 
MPGVPPKPML AMTGELPAGA GWAYEFKWDG IRALADLSGG RRHVYARSGV EVTVAYPELA 

        70         80         90        100        110        120 
GLPAQVDNAL LDGEVVLFGA AGQPSFTALA ERMHVRESGR AARLAATLPV TYLIFDLLRL 

       130        140        150        160        170        180 
DGVDLTGHSW QQRRAALDGL GLAGPRWAVP PVFWDGPATY QAAGEHGLEG VMAKRVGSIY 

       190        200        210        220        230        240 
RPGTRSPDWV KVKLEVTGDF VVGGWRPGAR RLGGLLVGVP RPDGRLTFRG RVGGGIGAAL 

       250        260        270        280        290        300 
ERELLRELEP LRAAGSPFAG DLPREDARTA VWVSPRVVVE VKYGQLTPDG RLRFPRVLRL 

       310 
RPDKPAEEVD DAG 

« Hide

References

[1]"Complete sequence of Salinispora arenicola CNS-205."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Jensen P.R., Moore B.S., Penn K. expand/collapse author list , Jenkins C., Udwary D., Xiang L., Gontang E., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CNS-205 EMBL ABW00134.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000850 Genomic DNA. Translation: ABW00134.1.
RefSeqYP_001539124.1. NC_009953.1.

3D structure databases

ProteinModelPortalA8M566.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391037.Sare_4352.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABW00134; ABW00134; Sare_4352.
GeneID5708420.
KEGGsaq:Sare_4352.
PATRIC23437295. VBISalAre38676_4393.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000222509.
KOK01971.
OMAVEVKYGQ.
OrthoDBEOG661H49.
ProtClustDBCLSK962101.

Enzyme and pathway databases

BioCycSARE391037:GH66-4405-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8M566_SALAI
AccessionPrimary (citable) accession number: A8M566
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: April 16, 2014
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)