A8M566 (A8M566_SALAI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
DNA polymerase LigD ligase region EMBL ABW00134.1

Gene names

Ordered Locus Names:

Sare_4352

Organism

Salinispora arenicola (strain CNS-205) [Complete proteome] [HAMAP] EMBL ABW00134.1

Taxonomic identifier

391037 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micromonosporineae › Micromonosporaceae › Salinispora › Salinispora arenicola

Protein attributes

Sequence length	313 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ABW00134.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8M566 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: C920E2FC0FB62449	FASTA	313	33,657
	10 20 30 40 50 60 MPGVPPKPML AMTGELPAGA GWAYEFKWDG IRALADLSGG RRHVYARSGV EVTVAYPELA 70 80 90 100 110 120 GLPAQVDNAL LDGEVVLFGA AGQPSFTALA ERMHVRESGR AARLAATLPV TYLIFDLLRL 130 140 150 160 170 180 DGVDLTGHSW QQRRAALDGL GLAGPRWAVP PVFWDGPATY QAAGEHGLEG VMAKRVGSIY 190 200 210 220 230 240 RPGTRSPDWV KVKLEVTGDF VVGGWRPGAR RLGGLLVGVP RPDGRLTFRG RVGGGIGAAL 250 260 270 280 290 300 ERELLRELEP LRAAGSPFAG DLPREDARTA VWVSPRVVVE VKYGQLTPDG RLRFPRVLRL 310 RPDKPAEEVD DAG

References

[1]

"Complete sequence of Salinispora arenicola CNS-205." US DOE Joint Genome Institute Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Jensen P.R., Moore B.S., Penn K. , Jenkins C., Udwary D., Xiang L., Gontang E., Richardson P. Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CNS-205.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000850 Genomic DNA. Translation: ABW00134.1.
RefSeq	YP_001539124.1. NC_009953.1.
3D structure databases
ProteinModelPortal	A8M566.
ModBase	Search...
Protein-protein interaction databases
STRING	391037.Sare_4352.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ABW00134; ABW00134; Sare_4352.
GeneID	5708420.
KEGG	saq:Sare_4352.
PATRIC	23437295. VBISalAre38676_4393.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222509.
KO	K01971.
OMA	VEVKYGQ.
ProtClustDB	CLSK962101.
Enzyme and pathway databases
BioCyc	SARE391037:GH66-4405-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS50160. DNA_LIGASE_A3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8M566_SALAI

Accession

Primary (citable) accession number: A8M566

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	May 29, 2013
This is version 33 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)