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A8M566

- A8M566_SALAI

UniProt

A8M566 - A8M566_SALAI

Protein
Submitted name:

DNA polymerase LigD ligase region

Gene

Sare_4352

Organism
Salinispora arenicola (strain CNS-205)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 39 (01 Oct 2014)
      Sequence version 1 (04 Dec 2007)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciSARE391037:GH66-4405-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA polymerase LigD ligase regionImported
    Gene namesi
    Ordered Locus Names:Sare_4352Imported
    OrganismiSalinispora arenicola (strain CNS-205)Imported
    Taxonomic identifieri391037 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora
    ProteomesiUP000001153: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi391037.Sare_4352.

    Structurei

    3D structure databases

    ProteinModelPortaliA8M566.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222509.
    KOiK01971.
    OMAiVEVKYGQ.
    OrthoDBiEOG661H49.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    A8M566-1 [UniParc]FASTAAdd to Basket

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    MPGVPPKPML AMTGELPAGA GWAYEFKWDG IRALADLSGG RRHVYARSGV    50
    EVTVAYPELA GLPAQVDNAL LDGEVVLFGA AGQPSFTALA ERMHVRESGR 100
    AARLAATLPV TYLIFDLLRL DGVDLTGHSW QQRRAALDGL GLAGPRWAVP 150
    PVFWDGPATY QAAGEHGLEG VMAKRVGSIY RPGTRSPDWV KVKLEVTGDF 200
    VVGGWRPGAR RLGGLLVGVP RPDGRLTFRG RVGGGIGAAL ERELLRELEP 250
    LRAAGSPFAG DLPREDARTA VWVSPRVVVE VKYGQLTPDG RLRFPRVLRL 300
    RPDKPAEEVD DAG 313
    Length:313
    Mass (Da):33,657
    Last modified:December 4, 2007 - v1
    Checksum:iC920E2FC0FB62449
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000850 Genomic DNA. Translation: ABW00134.1.
    RefSeqiYP_001539124.1. NC_009953.1.

    Genome annotation databases

    EnsemblBacteriaiABW00134; ABW00134; Sare_4352.
    GeneIDi5708420.
    KEGGisaq:Sare_4352.
    PATRICi23437295. VBISalAre38676_4393.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP000850 Genomic DNA. Translation: ABW00134.1 .
    RefSeqi YP_001539124.1. NC_009953.1.

    3D structure databases

    ProteinModelPortali A8M566.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 391037.Sare_4352.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ABW00134 ; ABW00134 ; Sare_4352 .
    GeneIDi 5708420.
    KEGGi saq:Sare_4352.
    PATRICi 23437295. VBISalAre38676_4393.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222509.
    KOi K01971.
    OMAi VEVKYGQ.
    OrthoDBi EOG661H49.

    Enzyme and pathway databases

    BioCyci SARE391037:GH66-4405-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CNS-205Imported.

    Entry informationi

    Entry nameiA8M566_SALAI
    AccessioniPrimary (citable) accession number: A8M566
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 4, 2007
    Last sequence update: December 4, 2007
    Last modified: October 1, 2014
    This is version 39 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3