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A8M313 (A8M313_SALAI) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 48. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:Sare_2419 EMBL ABV98275.1
OrganismSalinispora arenicola (strain CNS-205) [Complete proteome] [HAMAP] EMBL ABV98275.1
Taxonomic identifier391037 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeSalinispora

Protein attributes

Sequence length355 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH merR-type DNA-binding domain. RuleBase RU000703

Ontologies

Keywords
   LigandDNA-binding RuleBase RU000703
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processregulation of transcription, DNA-templated

Inferred from electronic annotation. Source: InterPro

   Molecular_functionDNA binding

Inferred from electronic annotation. Source: UniProtKB-KW

catalytic activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
A8M313 [UniParc].

Last modified December 4, 2007. Version 1.
Checksum: B2ED31A690787141

FASTA35537,506
        10         20         30         40         50         60 
MGLLTIGAFA QAARLTPKAL RLYDQVGLLP PAAVDPESGY RLYGPDQLPL ARLIAQLRRI 

        70         80         90        100        110        120 
GMPLATIRVV CGLDPAAAAE TIKAYWQQVT ADTAARARLA AVLVDHLSRG ETTVSHTNRN 

       130        140        150        160        170        180 
LAVRYAAGCD TGLVRDSNED AAYASDQLFA VADGMRGHGG AAASAAAIDV LKVLERVDAP 

       190        200        210        220        230        240 
AADLLTMLGN AITNADRTIR GLATDDHQPV TTLTALLRSG SQLALVHVGD TRVYLLRGGA 

       250        260        270        280        290        300 
LALLTQDHTW VQTEVDQGRL DRDQAAVHPQ RALLVRALGS GQQVEVDLAL RTALPGDRYL 

       310        320        330        340        350 
LCSDGLSAIV GRGCLHSTLS ASDDPERTVQ RLIELARAEG APDNIACVVV DIAEA 

« Hide

References

[1]"Complete sequence of Salinispora arenicola CNS-205."
US DOE Joint Genome Institute
Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E., Tice H., Pitluck S., Foster B., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Ivanova N., Jensen P.R., Moore B.S., Penn K. expand/collapse author list , Jenkins C., Udwary D., Xiang L., Gontang E., Richardson P.
Submitted (OCT-2007) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: CNS-205 EMBL ABV98275.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP000850 Genomic DNA. Translation: ABV98275.1.
RefSeqYP_001537266.1. NC_009953.1.

3D structure databases

ProteinModelPortalA8M313.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING391037.Sare_2419.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaABV98275; ABV98275; Sare_2419.
GeneID5706834.
KEGGsaq:Sare_2419.
PATRIC23433376. VBISalAre38676_2454.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0789.
HOGENOMHOG000235782.
OMANQDTAYA.
OrthoDBEOG65N17S.

Enzyme and pathway databases

BioCycSARE391037:GH66-2451-MONOMER.

Family and domain databases

Gene3D3.60.40.10. 1 hit.
InterProIPR009061. DNA-bd_dom_put.
IPR000551. MerR-type_HTH_dom.
IPR001932. PP2C-like_dom.
IPR015655. Protein_Pase_2C.
[Graphical view]
PANTHERPTHR13832. PTHR13832. 1 hit.
PfamPF13411. MerR_1. 1 hit.
PF00481. PP2C. 1 hit.
[Graphical view]
SMARTSM00422. HTH_MERR. 1 hit.
SM00331. PP2C_SIG. 1 hit.
SM00332. PP2Cc. 1 hit.
[Graphical view]
SUPFAMSSF46955. SSF46955. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEPS00552. HTH_MERR_1. 1 hit.
PS50937. HTH_MERR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameA8M313_SALAI
AccessionPrimary (citable) accession number: A8M313
Entry history
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: May 14, 2014
This is version 48 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)