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Protein
Submitted name:

DNA polymerase LigD polymerase domain

Gene

Sare_1486

Organism
Salinispora arenicola (strain CNS-205)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciSARE391037:GH66-1509-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD polymerase domainImported
Gene namesi
Ordered Locus Names:Sare_1486Imported
OrganismiSalinispora arenicola (strain CNS-205)Imported
Taxonomic identifieri391037 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicromonosporalesMicromonosporaceaeSalinispora
ProteomesiUP000001153 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi391037.Sare_1486.

Structurei

3D structure databases

ProteinModelPortaliA8LUN1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

A8LUN1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGGAKAVAEE IEVAGRHVRL SSPDRVMFPQ RGFTKADVFH YYLAVGPGIM
60 70 80 90 100
RALGQRPTTL QRFPEGIEGE AFFQKRVPAR GMPSWVHTAK ISFPSGRTAA
110 120 130 140 150
ELCPADLAHV AWAAQMGTVV FHPWPVRAAD PDRPDELRID LDPQPGTDFA
160 170 180 190 200
DAARAASELH GILTELGAPG WPKTSGGRGV HVYLRIRPHW TFVEVRRATI
210 220 230 240 250
ALARELERRR PELVTTAWWK EERGARVFVD YNQMARDRTI ACAYSLRANA
260 270 280 290 300
RATVSTPLAW DELADVDPDD FDLRSVPARL AERGDPHADI DDAAWDITPL
310 320 330 340
LEWAERDAAN GQGDLPYPPE HPKMPGEPKR VQPSKDRDRP R
Length:341
Mass (Da):38,048
Last modified:December 4, 2007 - v1
Checksum:i88D2A68D540C7DF0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000850 Genomic DNA. Translation: ABV97384.1.
RefSeqiWP_012181692.1. NC_009953.1.
YP_001536375.1. NC_009953.1.

Genome annotation databases

EnsemblBacteriaiABV97384; ABV97384; Sare_1486.
GeneIDi5707491.
KEGGisaq:Sare_1486.
PATRICi23431470. VBISalAre38676_1511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP000850 Genomic DNA. Translation: ABV97384.1.
RefSeqiWP_012181692.1. NC_009953.1.
YP_001536375.1. NC_009953.1.

3D structure databases

ProteinModelPortaliA8LUN1.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi391037.Sare_1486.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiABV97384; ABV97384; Sare_1486.
GeneIDi5707491.
KEGGisaq:Sare_1486.
PATRICi23431470. VBISalAre38676_1511.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiFHPWPVR.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciSARE391037:GH66-1509-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CNS-205Imported.

Entry informationi

Entry nameiA8LUN1_SALAI
AccessioniPrimary (citable) accession number: A8LUN1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 4, 2007
Last sequence update: December 4, 2007
Last modified: June 24, 2015
This is version 41 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.