A8LSD7 (A8LSD7_DINSH) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Beta-ketoacyl synthase EMBL ABV92751.1
EC=2.3.1.41 EMBL ABV92751.1

Gene names

Name:	fabB EMBL ABV92751.1
Ordered Locus Names:	Dshi_1009

Organism

Dinoroseobacter shibae (strain DFL 12) [Complete proteome] [HAMAP]

Taxonomic identifier

398580 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhodobacterales › Rhodobacteraceae › Dinoroseobacter

Protein attributes

Sequence length	409 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the beta-ketoacyl-ACP synthases family. RuleBase RU003694

Ontologies

Keywords
Molecular function	Acyltransferase EMBL ABV92751.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	biosynthetic process Inferred from electronic annotation. Source: InterPro
Molecular function	3-oxoacyl-[acyl-carrier-protein] synthase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	A8LSD7 [UniParc]. Last modified December 4, 2007. Version 1. Checksum: 60FAD7C40542CC6E	FASTA	409	43,107
	10 20 30 40 50 60 MRRVVITGMG IVSPIGNTVS EVEASLRAGR SGITFAETYA ENGFRSQVHG VPDIVLEDHI 70 80 90 100 110 120 DKRNLRFMGP GAAFNFIAMQ QAIADSGLED SNVSNERSGL IMGSGGPSTS NFFQAFKTVK 130 140 150 160 170 180 EKGAPKRMGP FMVTRCMSST NSACLATPFK IKGVNYSITS ACSTSAHCIG NGVELIQMGK 190 200 210 220 230 240 QDIVFAGGGE EIDWTLSCLF DAMGAMSSKY NDTPTTASRT FDATRDGFVI AGGGGVLVLE 250 260 270 280 290 300 ELEHAKARGA KIYAEVTGYG ATSDGYDMVA PSGEGGERSM RQAIATLPEG RSVDYINAHG 310 320 330 340 350 360 TSTPVGDVTE IEAVRRVFGE GTTPPVASTK SLTGHSLGAT GVHEAIYSLI MMNKGFIAAS 370 380 390 400 ANITELDPAI HPEEIVTELR EGVTLDSVLS NSFGFGGTNA TLLMSRYLD

References

[1]

"The complete genome sequence of the algal symbiont Dinoroseobacter shibae: a hitchhiker's guide to life in the sea." Wagner-Dobler I., Ballhausen B., Berger M., Brinkhoff T., Buchholz I., Bunk B., Cypionka H., Daniel R., Drepper T., Gerdts G., Hahnke S., Han C., Jahn D., Kalhoefer D., Kiss H., Klenk H.P., Kyrpides N., Liebl W. , Liesegang H., Meincke L., Pati A., Petersen J., Piekarski T., Pommerenke C., Pradella S., Pukall R., Rabus R., Stackebrandt E., Thole S., Thompson L., Tielen P., Tomasch J., von Jan M., Wanphrut N., Wichels A., Zech H., Simon M. ISME J. 4:61-77(2010) [PubMed: 19741735] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DFL 12.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP000830 Genomic DNA. Translation: ABV92751.1.
RefSeq	YP_001532352.1. NC_009952.1.
3D structure databases
ProteinModelPortal	A8LSD7.
SMR	A8LSD7. Positions 1-409.
ModBase	Search...
Protein-protein interaction databases
STRING	A8LSD7.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	5710525.
GenomeReviews	Gene locus Dshi_1009 in contig CP000830_GR.
KEGG	dsh:Dshi_1009.
PATRIC	21814587. VBIDinShi9476_1047.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG757733.
OMA	MQMALAD.
ProtClustDB	CLSK940946.
Family and domain databases
InterPro	IPR000794. Beta-ketoacyl_synthase. IPR018201. Ketoacyl_synth_AS. IPR014031. Ketoacyl_synth_C. IPR014030. Ketoacyl_synth_N. IPR016039. Thiolase-like. IPR016038. Thiolase-like_subgr. [Graphical view]
Gene3D	G3DSA:3.40.47.10. Thiolase-like_subgr. 2 hits.
KO	K00647.
PANTHER	PTHR11712. Ketoacyl_synth. 1 hit.
Pfam	PF00109. ketoacyl-synt. 1 hit. PF02801. Ketoacyl-synt_C. 1 hit. [Graphical view]
SUPFAM	SSF53901. Thiolase-like. 2 hits.
PROSITE	PS00606. B_KETOACYL_SYNTHASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

A8LSD7_DINSH

Accession

Primary (citable) accession number: A8LSD7

Entry history

Integrated into UniProtKB/TrEMBL:	December 4, 2007
Last sequence update:	December 4, 2007
Last modified:	December 14, 2011
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)